RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 LIN9Q5TKA1 542 aa11.65□□□□□ -0.54
ZIC4-216ENST00000494569 SND1Q7KZF4 910 aaKnown RBP eCLIP11.65□□□□□ -0.54
ZIC4-216ENST00000494569 ZIM3Q96PE6 472 aa11.65□□□□□ -0.54
ZIC4-216ENST00000494569 GCOM2Q9BZD3 368 aaPredicted RBP11.65□□□□□ -0.54
ZIC4-216ENST00000494569 SRRDQ9UH36 339 aa11.65□□□□□ -0.54
ZIC4-216ENST00000494569 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.55
ZIC4-216ENST00000494569 O00370 1275 aa11.65□□□□□ -0.55
ZIC4-216ENST00000494569 FOXD4Q12950 439 aaPredicted RBP11.65□□□□□ -0.55
ZIC4-216ENST00000494569 PKDCCQ504Y2 493 aa11.65□□□□□ -0.55
ZIC4-216ENST00000494569 ZNF667Q5HYK9 610 aa11.65□□□□□ -0.55
ZIC4-216ENST00000494569 MAATS1Q7Z4T9 603 aa11.65□□□□□ -0.55
ZIC4-216ENST00000494569 C10orf67Q8IYJ2 551 aa11.65□□□□□ -0.55
ZIC4-216ENST00000494569 C3orf20Q8ND61 904 aa11.65□□□□□ -0.55
ZIC4-216ENST00000494569 CELF4Q9BZC1 486 aaKnown RBP11.65□□□□□ -0.55
ZIC4-216ENST00000494569 DPP3Q9NY33 737 aa11.65□□□□□ -0.55
ZIC4-216ENST00000494569 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.65□□□□□ -0.55
ZIC4-216ENST00000494569 MYADML2A6NDP7 307 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 TREHO43280 583 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 CD58P19256 250 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 SSTR3P32745 418 aaPredicted RBP11.64□□□□□ -0.55
ZIC4-216ENST00000494569 CDH8P55286 799 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 SNX17Q15036 470 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 TAZQ16635 292 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 LRRC38Q5VT99 294 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 GPR153Q6NV75 609 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 TMEM35BQ8NCS4 154 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 CCDC26Q8TAB7 109 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 SH3TC2Q8TF17 1288 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 NR2E3Q9Y5X4 410 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 DUSP11O75319 330 aaKnown RBP11.64□□□□□ -0.55
ZIC4-216ENST00000494569 NPTXRO95502 500 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 PFKMP08237 780 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 CYP2C9P11712 490 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 POLR2BP30876 1174 aaKnown RBP11.64□□□□□ -0.55
ZIC4-216ENST00000494569 FNTAP49354 379 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 PTPN20Q4JDL3 420 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 TMEM176AQ96HP8 235 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 ERP44Q9BS26 406 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 GEMIN8Q9NWZ8 242 aaKnown RBP11.64□□□□□ -0.55
ZIC4-216ENST00000494569 CENPFP49454 3210 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 DNAH12Q6ZR08 3092 aa11.64□□□□□ -0.55
ZIC4-216ENST00000494569 GOLGA6BA6NDN3 693 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 C3orf70A6NLC5 250 aaPredicted RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 ERLIN2O94905 339 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 KCNE1P15382 129 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 RPL7AP62424 266 aaKnown RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 RBP5P82980 135 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 TAP1Q03518 808 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 LRIG3Q6UXM1 1119 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 TMC3Q7Z5M5 1100 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 JAMLQ86YT9 394 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 ARFGAP1Q8N6T3 406 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 C18orf8Q96DM3 657 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 HPDLQ96IR7 371 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 ACBD3Q9H3P7 528 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 SPOPO43791 374 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 COILP38432 576 aaPredicted RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 GPD2P43304 727 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 GUCY2FP51841 1108 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 CRYBB1P53674 252 aaPredicted RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 ZNF200P98182 395 aaPredicted RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 CNGA2Q16280 664 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 WDR72Q3MJ13 1102 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 SEL1L2Q5TEA6 688 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 TMCO4Q5TGY1 634 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 NOTUMQ6P988 496 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 SCARA5Q6ZMJ2 495 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 RPAINQ86UA6 219 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 LRRC52Q8N7C0 313 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 FNIP1Q8TF40 1166 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 MCRS1Q96EZ8 462 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 RUNDC3BQ96NL0 473 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 KATNAL1Q9BW62 490 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 ARHGAP39Q9C0H5 1083 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 FAM114A2Q9NRY5 505 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 SNTG2Q9NY99 539 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 IP6K2Q9UHH9 426 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 BARX2Q9UMQ3 279 aaPredicted RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 BRCA2P51587 3418 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 MYO1FO00160 1098 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 DLL1O00548 723 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 PIRO00625 290 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 GJB6O95452 261 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 CYP2B6P20813 491 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 RPL34P49207 117 aaKnown RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 DR1Q01658 176 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 FSCN1Q16658 493 aaKnown RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 UBAP2Q5T6F2 1119 aaKnown RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 CCSAPQ6IQ19 270 aaPredicted RBP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 DDX42Q86XP3 938 aaKnown RBP eCLIP11.63□□□□□ -0.55
ZIC4-216ENST00000494569 XYLT1Q86Y38 959 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 EXD1Q8NHP7 514 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 DNAJB3Q8WWF6 145 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 OSMRQ99650 979 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 YY1AP1Q9H869 796 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 AAASQ9NRG9 546 aa11.63□□□□□ -0.55
ZIC4-216ENST00000494569 SIGLEC16A6NMB1 481 aa11.62□□□□□ -0.55
ZIC4-216ENST00000494569 DAPK3O43293 454 aa11.62□□□□□ -0.55
ZIC4-216ENST00000494569 MED7O43513 233 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms