RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 TADA3O75528 432 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 ABLIM3O94929 683 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 STAU1O95793 577 aaKnown RBP9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 GLUD1P00367 558 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 PPP1R2P41236 205 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 GUCY2FP51841 1108 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 LILRA4P59901 499 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 COPS2P61201 443 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 CYP24A1Q07973 514 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 SKIV2LQ15477 1246 aaKnown RBP9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 FAM171A1Q5VUB5 890 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 SCARA3Q6AZY7 606 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 ANKS3Q6ZW76 656 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 GPR149Q86SP6 731 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 TXLNBQ8N3L3 684 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 GOLGA5Q8TBA6 731 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 SPATA18Q8TC71 538 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 RIN2Q8WYP3 895 aaPredicted RBP9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 CCDC47Q96A33 483 aaKnown RBP9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 SAAL1Q96ER3 474 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 RTP3Q9BQQ7 232 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 FAM213AQ9BRX8 229 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 TSPYL1Q9H0U9 437 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 HSD3B7Q9H2F3 369 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 PLEKHA4Q9H4M7 779 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 SLC39A2Q9NP94 309 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 EXOC1Q9NV70 894 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 RBAKQ9NYW8 714 aaPredicted RBP9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 COL4A3Q01955 1670 aa9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 ZNF638Q14966 1978 aaKnown RBP9.03□□□□□ -0.96
GPATCH4-207ENST00000494414 TECTAO75443 2155 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 WDR27A2RRH5 827 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 I3L4J1 428 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 TRAPPC3O43617 180 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 CSPG5O95196 566 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 ROR1Q01973 937 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 STIM1Q13586 685 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 NAA30Q147X3 362 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 SURF1Q15526 300 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 SNRNP35Q16560 246 aaKnown RBP9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 C1orf220Q5T0J3 134 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 HS2ST1Q7LGA3 356 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 WDR49Q8IV35 697 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 XXYLT1Q8NBI6 393 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 OR5B17Q8NGF7 314 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 MICAL1Q8TDZ2 1067 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 NECTIN4Q96NY8 510 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 NECAB3Q96P71 396 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 UHRF1Q96T88 793 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 PKMYT1Q99640 499 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 CGRRF1Q99675 332 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 PHF7Q9BWX1 381 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 CARD6Q9BX69 1037 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 OXCT2Q9BYC2 517 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 IGFLR1Q9H665 355 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 VRTNQ9H8Y1 702 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 AVENQ9NQS1 362 aaPredicted RBP9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 MAN1C1Q9NR34 630 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 INTS13Q9NVM9 706 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 GDAP2Q9NXN4 497 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 DPP3Q9NY33 737 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 CWC15Q9P013 229 aaKnown RBP9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 FBXL5Q9UKA1 691 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 ITGA11Q9UKX5 1188 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 MAFFQ9ULX9 164 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 FAM50BQ9Y247 325 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 ZNF318Q5VUA4 2279 aa9.02□□□□□ -0.97
GPATCH4-207ENST00000494414 CCDC151A5D8V7 595 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 GOLGA8IPA6NC78 632 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 ZNF233A6NK53 670 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 GOLGA8JA6NMD2 632 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 PNMA6AP0CW24 399 aaPredicted RBP9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 RPL17P18621 184 aaKnown RBP9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 BMP6P22004 513 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 PNPLA4P41247 253 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 MTHFRP42898 656 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 MATR3P43243 847 aaKnown RBP eCLIP9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 EDRF1Q3B7T1 1238 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 ZNF658Q5TYW1 1059 aaPredicted RBP9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 CENPPQ6IPU0 288 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 LLGL2Q6P1M3 1020 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 NELFCDQ8IXH7 590 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 TCEAL8Q8IYN2 117 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 SYCP3Q8IZU3 236 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 NOC3LQ8WTT2 800 aaKnown RBP9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 HNRNPLLQ8WVV9 542 aaKnown RBP9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 IQCDQ96DY2 449 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 FAM84AQ96KN4 292 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 ZNF560Q96MR9 790 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 XYLT2Q9H1B5 865 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 POMKQ9H5K3 350 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 HSFX1Q9UBD0 423 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 CDH22Q9UJ99 828 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 CDC23Q9UJX2 597 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 USTQ9Y2C2 406 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 MRFAP1Q9Y605 127 aa9.01□□□□□ -0.97
GPATCH4-207ENST00000494414 CTAGE9A4FU28 777 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms