RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 ADAM15Q13444 863 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ARHGEF7Q14155 803 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 DLGAP5Q15398 846 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 INSCQ1MX18 579 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 TMTC4Q5T4D3 741 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ZNF648Q5T619 568 aaPredicted RBP5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ATPAF1Q5TC12 328 aaPredicted RBP5.07□□□□□ -1.6
GTF3A-208ENST00000493903 MAP3K21Q5TCX8 1036 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 CCDC30Q5VVM6 783 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 PLAG1Q6DJT9 500 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 RINLQ6ZS11 566 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 USP37Q86T82 979 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 GAS2L3Q86XJ1 694 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ZMIZ2Q8NF64 920 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 AFG1LQ8WV93 481 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 NEIL1Q96FI4 390 aaPredicted RBP5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ZSWIM3Q96MP5 696 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 MOGAT1Q96PD6 335 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 PPP1R9BQ96SB3 815 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 NUDT16L1Q9BRJ7 211 aaKnown RBP5.07□□□□□ -1.6
GTF3A-208ENST00000493903 CHCHD6Q9BRQ6 235 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 NDC1Q9BTX1 674 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 MS4A7Q9GZW8 240 aaPredicted RBP5.07□□□□□ -1.6
GTF3A-208ENST00000493903 NSUN3Q9H649 340 aaKnown RBP5.07□□□□□ -1.6
GTF3A-208ENST00000493903 KCNK12Q9HB15 430 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ZBTB26Q9HCK0 441 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 ZSCAN32Q9NX65 697 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 FAM53CQ9NYF3 392 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 XPR1Q9UBH6 696 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 SLC23A1Q9UHI7 598 aa5.07□□□□□ -1.6
GTF3A-208ENST00000493903 AQP7P3A6NL99 342 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 WNT10BO00744 389 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 ZBED4O75132 1171 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 COQ9O75208 318 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 GFPT2O94808 682 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 TOX4O94842 621 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 TMEM63AO94886 807 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 HAUS5O94927 633 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 AMHP03971 560 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 SNRPA1P09661 255 aaKnown RBP5.06□□□□□ -1.6
GTF3A-208ENST00000493903 TPH1P17752 444 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 RAD52P43351 418 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 CCR5P51681 352 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 ATXN1P54253 815 aaKnown RBP5.06□□□□□ -1.6
GTF3A-208ENST00000493903 ALDH18A1P54886 795 aaKnown RBP5.06□□□□□ -1.6
GTF3A-208ENST00000493903 SCAPQ12770 1279 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 CUL4BQ13620 913 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 PCOLCEQ15113 449 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 FAM26FQ5R3K3 315 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 MFSD14BQ5SR56 506 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 FAXCQ5TGI0 409 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 FAM160B1Q5W0V3 765 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 CRTC1Q6UUV9 634 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 ANKS1BQ7Z6G8 1248 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 CCDC28AQ8IWP9 274 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 REXO1L1PQ8IX06 675 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 NRSN1Q8IZ57 195 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 TCP11L2Q8N4U5 519 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 POU5F2Q8N7G0 328 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 DNERQ8NFT8 737 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 ADAMTS15Q8TE58 950 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 UCMAQ8WVF2 138 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 HVCN1Q96D96 273 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 RRP36Q96EU6 259 aaKnown RBP5.06□□□□□ -1.6
GTF3A-208ENST00000493903 TWNKQ96RR1 684 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 BARD1Q99728 777 aaKnown RBP5.06□□□□□ -1.6
GTF3A-208ENST00000493903 MRI1Q9BV20 369 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 AGXT2Q9BYV1 514 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 TINAGL1Q9GZM7 467 aaPredicted RBP5.06□□□□□ -1.6
GTF3A-208ENST00000493903 ENKD1Q9H0I2 346 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 KCNH6Q9H252 994 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 SLC6A15Q9H2J7 730 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 ZNF552Q9H707 407 aaPredicted RBP5.06□□□□□ -1.6
GTF3A-208ENST00000493903 SMYD2Q9NRG4 433 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 DKK4Q9UBT3 224 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 AASSQ9UDR5 926 aa5.06□□□□□ -1.6
GTF3A-208ENST00000493903 RBM8AQ9Y5S9 174 aaKnown RBP5.06□□□□□ -1.6
GTF3A-208ENST00000493903 TCRBV7S2A1N4TA0A589 114 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 OR2W5A6NFC9 320 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 ZNF785A8K8V0 405 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 CXorf49A8MYA2 514 aaPredicted RBP5.05□□□□□ -1.6
GTF3A-208ENST00000493903 H0Y3Z8 333 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 RAB27BO00194 218 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 KIAA0391O15091 583 aaKnown RBP5.05□□□□□ -1.6
GTF3A-208ENST00000493903 FARP2O94887 1054 aaPredicted RBP5.05□□□□□ -1.6
GTF3A-208ENST00000493903 ATF2P15336 505 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 RRM1P23921 792 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 MC3RP41968 323 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 MAN2A2P49641 1150 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 MCM2P49736 904 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 GZMKP49863 264 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 MRE11P49959 708 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 ZNF135P52742 658 aaPredicted RBP5.05□□□□□ -1.6
GTF3A-208ENST00000493903 SEC24CP53992 1094 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 PRKAA2P54646 552 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 PSMC1P62191 440 aaKnown RBP5.05□□□□□ -1.6
GTF3A-208ENST00000493903 MESP2Q0VG99 397 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 SLC12A1Q13621 1099 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 SURF1Q15526 300 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms