RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 C7orf25Q9BPX7 421 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 TASP1Q9H6P5 420 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 LMAN1LQ9HAT1 526 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 TRPV5Q9NQA5 729 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 INTS13Q9NVM9 706 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 GTF3C4Q9UKN8 822 aa15.74■□□□□ 0.11
ATG4B-223ENST00000493618 CHADO15335 359 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 EIF3DO15371 548 aaKnown RBP eCLIP15.73■□□□□ 0.11
ATG4B-223ENST00000493618 TGFB1I1O43294 461 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 TNNC2P02585 160 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 CYP2F1P24903 491 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 CDC25CP30307 473 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 RPS9P46781 194 aaKnown RBP15.73■□□□□ 0.11
ATG4B-223ENST00000493618 CYP2J2P51589 502 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 DNM1Q05193 864 aaKnown RBP15.73■□□□□ 0.11
ATG4B-223ENST00000493618 FCHO2Q0JRZ9 810 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 SMARCB1Q12824 385 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 CUL4BQ13620 913 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 DDR2Q16832 855 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 HINFPQ9BQA5 517 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 ACBD6Q9BR61 282 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 SLC46A2Q9BY10 475 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 SLC39A2Q9NP94 309 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 GDAP2Q9NXN4 497 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 FAM13BQ9NYF5 915 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 GTSE1Q9NYZ3 720 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 FBXO4Q9UKT5 387 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 R3HCC1Q9Y3T6 440 aaKnown RBP15.73■□□□□ 0.11
ATG4B-223ENST00000493618 WDR87Q6ZQQ6 2873 aa15.73■□□□□ 0.11
ATG4B-223ENST00000493618 KIAA0391O15091 583 aaKnown RBP15.72■□□□□ 0.11
ATG4B-223ENST00000493618 ATP2C2O75185 946 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 DLATP10515 647 aaKnown RBP15.72■□□□□ 0.11
ATG4B-223ENST00000493618 HMGA1P17096 107 aaKnown RBP15.72■□□□□ 0.11
ATG4B-223ENST00000493618 NLRP12P59046 1061 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 PSMC1P62191 440 aaKnown RBP15.72■□□□□ 0.11
ATG4B-223ENST00000493618 TNK2Q07912 1038 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 NFE2Q16621 373 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-223ENST00000493618 SOWAHAQ2M3V2 549 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 ZNF528Q3MIS6 628 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 RESP18Q5W5W9 173 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 UNC13DQ70J99 1090 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 TMEM150AQ86TG1 271 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 TMEM86AQ8N2M4 240 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 DCLK2Q8N568 766 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 TOP6BLQ8N6T0 577 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 MAB21L3Q8N8X9 362 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 SCFD1Q8WVM8 642 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 HPDLQ96IR7 371 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 CHAMP1Q96JM3 812 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 PKMYT1Q99640 499 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 SEMA4AQ9H3S1 761 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 AGPAT3Q9NRZ7 376 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 RBM12Q9NTZ6 932 aaKnown RBP15.72■□□□□ 0.11
ATG4B-223ENST00000493618 SERTAD1Q9UHV2 236 aa15.72■□□□□ 0.11
ATG4B-223ENST00000493618 MYBPHLA2RUH7 354 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 KINO60870 393 aaKnown RBP15.71■□□□□ 0.11
ATG4B-223ENST00000493618 F11P03951 625 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 LMO2P25791 158 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 MYO1EQ12965 1108 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 SURF1Q15526 300 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 SNRNP35Q16560 246 aaKnown RBP15.71■□□□□ 0.11
ATG4B-223ENST00000493618 DUOXA2Q1HG44 320 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 ARHGAP29Q52LW3 1261 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 WDR44Q5JSH3 913 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 TXNDC8Q6A555 127 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 CNNM4Q6P4Q7 775 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 TXNDC11Q6PKC3 985 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 SPATA2LQ8IUW3 424 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-223ENST00000493618 SCN4BQ8IWT1 228 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 KIAA2013Q8IYS2 634 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 BPIFB1Q8TDL5 484 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 LEO1Q8WVC0 666 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-223ENST00000493618 KBTBD7Q8WVZ9 684 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 CCDC127Q96BQ5 260 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 CHRDQ9H2X0 955 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 PRMT8Q9NR22 394 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-223ENST00000493618 CCL26Q9Y258 94 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 MYO16Q9Y6X6 1858 aa15.71■□□□□ 0.11
ATG4B-223ENST00000493618 ATG2BQ96BY7 2078 aa15.71■□□□□ 0.1
ATG4B-223ENST00000493618 FAM186AA6NE01 2351 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 SPECC1L-ADORA2AF8WAN1 911 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 GABRDO14764 452 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 PDGFRBP09619 1106 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 CHRNB1P11230 501 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 TNNI1P19237 187 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 LHX1P48742 406 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 EHHADHQ08426 723 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 PON2Q15165 354 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 TRAPPC11Q7Z392 1133 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 WDR49Q8IV35 697 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 CMTM8Q8IZV2 173 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 TTC16Q8NEE8 873 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 ATRIPQ8WXE1 791 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 MMS19Q96T76 1030 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 SYT15Q9BQS2 421 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 MAGEF1Q9HAY2 307 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 KIAA1586Q9HCI6 787 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 ZSCAN32Q9NX65 697 aa15.7■□□□□ 0.1
ATG4B-223ENST00000493618 OBP2AQ9NY56 170 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms