RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 GCNAQ96QF7 691 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 FOXP3Q9BZS1 431 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 ZNF711Q9Y462 761 aa12.28□□□□□ -0.44
HDAC4-210ENST00000493582 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 SPATA31A5Q5VU36 1347 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 SPATA31A6Q5VVP1 1343 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 SPATA31A7Q8IWB4 1347 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 A0A088AWK7 358 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 C15orf38-AP3S2A0A0A6YYH1 394 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 DENND3A2RUS2 1198 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 MSH4O15457 936 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 GRIN3BO60391 1043 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 SLITRK3O94933 977 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 CLPTM1O96005 669 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 OATP04181 439 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 SMIM18P0DKX4 95 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 ADRA2BP18089 450 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 EMP3P54852 163 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 SNAP25P60880 206 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 TRIP10Q15642 601 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 C1orf220Q5T0J3 134 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 ZFYVE27Q5T4F4 411 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 CENPUQ71F23 418 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 ARPINQ7Z6K5 226 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 ANKRD23Q86SG2 305 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 ARID3BQ8IVW6 561 aaPredicted RBP12.27□□□□□ -0.44
HDAC4-210ENST00000493582 MZB1Q8WU39 189 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 GAB3Q8WWW8 586 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 CCDC124Q96CT7 223 aaKnown RBP12.27□□□□□ -0.44
HDAC4-210ENST00000493582 MECRQ9BV79 373 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 RTFDC1Q9BY42 306 aaPredicted RBP12.27□□□□□ -0.44
HDAC4-210ENST00000493582 GRIP2Q9C0E4 1043 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 SSU72Q9NP77 194 aaKnown RBP12.27□□□□□ -0.44
HDAC4-210ENST00000493582 TAGLN3Q9UI15 199 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 ARFGEF1Q9Y6D6 1849 aa12.27□□□□□ -0.44
HDAC4-210ENST00000493582 MYOCOSA0A1B0GUC4 107 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 FKBP6O75344 327 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 NOVP48745 357 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 EPHB1P54762 984 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 FOLH1Q04609 750 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 BTKQ06187 659 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 ITGA9Q13797 1035 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 CYLC2Q14093 348 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-210ENST00000493582 UBAP2LQ14157 1087 aaKnown RBP12.27□□□□□ -0.45
HDAC4-210ENST00000493582 CCDC142Q17RM4 750 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 MSS51Q4VC12 460 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 ADGRD1Q6QNK2 874 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 TRIM67Q6ZTA4 783 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 PYROXD1Q8WU10 500 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 PRPF31Q8WWY3 499 aaKnown RBP12.27□□□□□ -0.45
HDAC4-210ENST00000493582 GPR101Q96P66 508 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-210ENST00000493582 CBWD1Q9BRT8 395 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 GPAMQ9HCL2 828 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 NDUFA13Q9P0J0 144 aa12.27□□□□□ -0.45
HDAC4-210ENST00000493582 MEIS2O14770 477 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 SLC26A4O43511 780 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 TAL1P17542 331 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-210ENST00000493582 GLRA2P23416 452 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 RPL5P46777 297 aaKnown RBP12.26□□□□□ -0.45
HDAC4-210ENST00000493582 ALCAMQ13740 583 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 QRICH1Q2TAL8 776 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 ANKRD20A4Q4UJ75 823 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 RALGPS1Q5JS13 557 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 SYDE2Q5VT97 1194 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 ZNF554Q86TJ5 538 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 LARGE2Q8N3Y3 721 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 EFCAB3Q8N7B9 438 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 SEMA4DQ92854 862 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 SERAC1Q96JX3 654 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 MBOAT7Q96N66 472 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 BTBD7Q9P203 1132 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-210ENST00000493582 ATP2A1O14983 1001 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 PDE5AO76074 875 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 MT-ND3P03897 115 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 PIM1P11309 404 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-210ENST00000493582 ATF7P17544 494 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-210ENST00000493582 ETV4P43268 484 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 GRAMD1BQ3KR37 738 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 RNF168Q8IYW5 571 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-210ENST00000493582 ZBTB8BQ8NAP8 495 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-210ENST00000493582 EPB41L1Q9H4G0 881 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 C10orf88Q9H8K7 445 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 LZTS1Q9Y250 596 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 HEMK1Q9Y5R4 338 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-210ENST00000493582 PHLPP1O60346 1717 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 MYH11P35749 1972 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 GOLGA8IPA6NC78 632 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 CAPN8A6NHC0 703 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 GOLGA8JA6NMD2 632 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 BOLA2-SMG1P6H3BVE0 249 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 LIASO43766 372 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 ALDH1B1P30837 517 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 MXI1P50539 228 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 COG7P83436 770 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 PLCB3Q01970 1234 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 HIC1Q14526 733 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 TLR1Q15399 786 aa12.26□□□□□ -0.45
HDAC4-210ENST00000493582 SLC15A2Q16348 729 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms