RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TTC9BQ8N6N2 239 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 EHBP1Q8NDI1 1231 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 MYCBPAPQ8TBZ2 947 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 FAXDC2Q96IV6 333 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 TNIP3Q96KP6 325 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 PKMYT1Q99640 499 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 BCO2Q9BYV7 579 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 WDR6Q9NNW5 1121 aaKnown RBP14.91□□□□□ -0.02
CCM2-217ENST00000492883 CRTAC1Q9NQ79 661 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 YIPF1Q9Y548 306 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 NME7Q9Y5B8 376 aa14.91□□□□□ -0.02
CCM2-217ENST00000492883 SYCE3A1L190 88 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 KCNJ18B7U540 433 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 SOAT2O75908 522 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 POU2F2P09086 479 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 HAPLN1P10915 354 aaPredicted RBP14.9□□□□□ -0.02
CCM2-217ENST00000492883 PRKCSHP14314 528 aaPredicted RBP14.9□□□□□ -0.02
CCM2-217ENST00000492883 SP100P23497 879 aaPredicted RBP14.9□□□□□ -0.02
CCM2-217ENST00000492883 SSTR3P32745 418 aaPredicted RBP14.9□□□□□ -0.02
CCM2-217ENST00000492883 NDST1P52848 882 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 KCNJ12Q14500 433 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 NFKBIBQ15653 356 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 TAF12Q16514 161 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 CCDC142Q17RM4 750 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 ANO6Q4KMQ2 910 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 MDH1BQ5I0G3 518 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 UNC93AQ86WB7 457 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 B3GALNT2Q8NCR0 500 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 MYLPFQ96A32 169 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 NT5C1BQ96P26 610 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 NECAB3Q96P71 396 aaPredicted RBP14.9□□□□□ -0.02
CCM2-217ENST00000492883 UHRF1Q96T88 793 aaPredicted RBP14.9□□□□□ -0.02
CCM2-217ENST00000492883 TUBGCP2Q9BSJ2 902 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 DNAI2Q9GZS0 605 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 DPEP3Q9H4B8 488 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 ABCB6Q9NP58 842 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 HCFC1R1Q9NWW0 138 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 DNMT3BQ9UBC3 853 aaKnown RBP14.9□□□□□ -0.02
CCM2-217ENST00000492883 NR2E1Q9Y466 385 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 ATG2AQ2TAZ0 1938 aa14.9□□□□□ -0.02
CCM2-217ENST00000492883 PES1O00541 588 aaKnown RBP14.89□□□□□ -0.03
CCM2-217ENST00000492883 FSHRP23945 695 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 CYP2F1P24903 491 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 EEF1GP26641 437 aaKnown RBP14.89□□□□□ -0.03
CCM2-217ENST00000492883 RPL10AP62906 217 aaKnown RBP14.89□□□□□ -0.03
CCM2-217ENST00000492883 NTHL1P78549 312 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 MYL5Q02045 173 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 ORC1Q13415 861 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 CUL2Q13617 745 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 VEPH1Q14D04 833 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 MAN2A1Q16706 1144 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 PABPC1LQ4VXU2 614 aaKnown RBP14.89□□□□□ -0.03
CCM2-217ENST00000492883 VWA3BQ502W6 1294 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 TCP11X2Q5H9J9 407 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 CYP4A22Q5TCH4 519 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 ACOT1Q86TX2 421 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 SCN4BQ8IWT1 228 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 TTC39CQ8N584 583 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 PCED1BQ96HM7 432 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 FUBP3Q96I24 572 aaKnown RBP eCLIP14.89□□□□□ -0.03
CCM2-217ENST00000492883 LPIN3Q9BQK8 851 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 CORO1BQ9BR76 489 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 NT5C1AQ9BXI3 368 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 FANCLQ9NW38 375 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 CEP72Q9P209 647 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 CLUHO75153 1309 aa14.89□□□□□ -0.03
CCM2-217ENST00000492883 TPM2P07951 284 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 RHOP08100 348 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 CDK11BP21127 795 aaKnown RBP14.88□□□□□ -0.03
CCM2-217ENST00000492883 BDNFP23560 247 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 TBXAS1P24557 533 aaPredicted RBP14.88□□□□□ -0.03
CCM2-217ENST00000492883 GBP2P32456 591 aaPredicted RBP14.88□□□□□ -0.03
CCM2-217ENST00000492883 GRIK1P39086 918 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 YWHAEP62258 255 aaKnown RBP14.88□□□□□ -0.03
CCM2-217ENST00000492883 ZP2Q05996 745 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 INCA1Q0VD86 236 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 CFAP221Q4G0U5 840 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 ZNF394Q53GI3 561 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 GBP6Q6ZN66 633 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 GET4Q7L5D6 327 aaPredicted RBP14.88□□□□□ -0.03
CCM2-217ENST00000492883 OTOP3Q7RTS5 596 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 DNAJB7Q7Z6W7 309 aaPredicted RBP14.88□□□□□ -0.03
CCM2-217ENST00000492883 ITIH5Q86UX2 942 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 HS6ST3Q8IZP7 471 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 GJD3Q8N144 294 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 CRYBG2Q8N1P7 616 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 PPM1KQ8N3J5 372 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 LMO3Q8TAP4 145 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 GIPC2Q8TF65 315 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 ACSF2Q96CM8 615 aaPredicted RBP14.88□□□□□ -0.03
CCM2-217ENST00000492883 CRACR2AQ9BSW2 395 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 MED10Q9BTT4 135 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 INTS2Q9H0H0 1204 aaKnown RBP14.88□□□□□ -0.03
CCM2-217ENST00000492883 NDST4Q9H3R1 872 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 CISHQ9NSE2 258 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 USTQ9Y2C2 406 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 MRPS23Q9Y3D9 190 aaKnown RBP14.88□□□□□ -0.03
CCM2-217ENST00000492883 ASB3Q9Y575 518 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 VWA8A3KMH1 1905 aa14.88□□□□□ -0.03
CCM2-217ENST00000492883 TRANK1O15050 2925 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms