RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 LPIN3Q9BQK8 851 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 MKNK1Q9BUB5 465 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 SLC46A2Q9BY10 475 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 KIF9Q9HAQ2 790 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 IL21Q9HBE4 155 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 PDE11AQ9HCR9 933 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 EHD2Q9NZN4 543 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 DMDP11532 3685 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 UBE4BO95155 1302 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 MYBPHLA2RUH7 354 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 NRG2O14511 850 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-205ENST00000492851 GABRDO14764 452 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 LILRB5O75023 590 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 NLRP12P59046 1061 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 ASIC1P78348 528 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 CFAP221Q4G0U5 840 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 INTS6LQ5JSJ4 861 aaKnown RBP13.37□□□□□ -0.27
COL6A1-205ENST00000492851 STXBP5Q5T5C0 1151 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 CC2D1AQ6P1N0 951 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-205ENST00000492851 UNC13DQ70J99 1090 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 HS2ST1Q7LGA3 356 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 MON1AQ86VX9 555 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 SPATA2LQ8IUW3 424 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-205ENST00000492851 WDR49Q8IV35 697 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 SPEM1Q8N4L4 309 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 SUMF1Q8NBK3 374 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 CXorf38Q8TB03 319 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 DHX58Q96C10 678 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 TRMT2BQ96GJ1 504 aaKnown RBP13.37□□□□□ -0.27
COL6A1-205ENST00000492851 HPDLQ96IR7 371 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 FNBP1Q96RU3 617 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 EPC1Q9H2F5 836 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 HSPBP1Q9NZL4 362 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 NCDNQ9UBB6 729 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 L1RE1Q9UN81 338 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 DOCK6Q96HP0 2047 aa13.37□□□□□ -0.27
COL6A1-205ENST00000492851 PVALEFA0A1B0GWK0 134 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 SLC38A8A6NNN8 435 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 SPECC1L-ADORA2AF8WAN1 911 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 POLR2DO15514 142 aaKnown RBP13.36□□□□□ -0.27
COL6A1-205ENST00000492851 F11P03951 625 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 ZSCAN22P10073 491 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-205ENST00000492851 HMGA1P17096 107 aaKnown RBP13.36□□□□□ -0.27
COL6A1-205ENST00000492851 CNR2P34972 360 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 PDE6CP51160 858 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 ZNF268Q14587 947 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-205ENST00000492851 ITPRIPL2Q3MIP1 535 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 FAM26FQ5R3K3 315 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 VSTM1Q6UX27 236 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 EPM2AIP1Q7L775 607 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-205ENST00000492851 ADGRF2Q8IZF7 708 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 GOLGA5Q8TBA6 731 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 RSPRY1Q96DX4 576 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 MYRFLQ96LU7 910 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 PI4K2AQ9BTU6 479 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 MTMR12Q9C0I1 747 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 TDP1Q9NUW8 608 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 GTF3C4Q9UKN8 822 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 RAB23Q9ULC3 237 aa13.36□□□□□ -0.27
COL6A1-205ENST00000492851 ATG13O75143 517 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 NOL4O94818 638 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 PAPSS2O95340 614 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-205ENST00000492851 PFKLP17858 780 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 TNNI1P19237 187 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 CYP2F1P24903 491 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 CTHP32929 405 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 MAGEA11P43364 429 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 ME1P48163 572 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 WNT7BP56706 349 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 CYP4F8P98187 520 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 PDGFRLQ15198 375 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 SNRNP35Q16560 246 aaKnown RBP13.35□□□□□ -0.27
COL6A1-205ENST00000492851 SOWAHAQ2M3V2 549 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 FAM171BQ6P995 826 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 SHC4Q6S5L8 630 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 KIAA2013Q8IYS2 634 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 MAB21L3Q8N8X9 362 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 XXYLT1Q8NBI6 393 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 ZSWIM2Q8NEG5 633 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 LRRC3BQ96PB8 259 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 FGFBP2Q9BYJ0 223 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 GKN1Q9NS71 199 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 TMLHEQ9NVH6 421 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 GTSE1Q9NYZ3 720 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 MAGEC2Q9UBF1 373 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-205ENST00000492851 SIX4Q9UIU6 781 aa13.35□□□□□ -0.27
COL6A1-205ENST00000492851 MAGED2Q9UNF1 606 aaPredicted RBP13.35□□□□□ -0.27
COL6A1-205ENST00000492851 F13A1P00488 732 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 USP17L7P0C7H9 530 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 ACAT1P24752 427 aaKnown RBP13.34□□□□□ -0.27
COL6A1-205ENST00000492851 ATICP31939 592 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 PPP3CCP48454 512 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 AP3M2P53677 418 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 PSMD2Q13200 908 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 RUNX3Q13761 415 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 PSMD6Q15008 389 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 DDR2Q16832 855 aa13.34□□□□□ -0.27
COL6A1-205ENST00000492851 TSSK4Q6SA08 328 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms