RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 MICAL2O94851 1124 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 ZNF202O95125 648 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 LMO2P25791 158 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 GABRR2P28476 465 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 TSPY1Q01534 308 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 PSMD2Q13200 908 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
MDC1-207ENST00000492462 COL9A2Q14055 689 aaPredicted RBP12.65□□□□□ -0.38
MDC1-207ENST00000492462 INTS6LQ5JSJ4 861 aaKnown RBP12.65□□□□□ -0.38
MDC1-207ENST00000492462 DCP1BQ8IZD4 617 aaKnown RBP12.65□□□□□ -0.38
MDC1-207ENST00000492462 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 TOP6BLQ8N6T0 577 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 LEMD2Q8NC56 503 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 ZSCAN18Q8TBC5 510 aaPredicted RBP12.65□□□□□ -0.38
MDC1-207ENST00000492462 FAM200AQ8TCP9 573 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 SPPL2BQ8TCT7 592 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 SMARCD2Q92925 531 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 PSMG2Q969U7 264 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 FNBP1Q96RU3 617 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 ACBD6Q9BR61 282 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 MRPL45Q9BRJ2 306 aaKnown RBP12.65□□□□□ -0.38
MDC1-207ENST00000492462 CGNQ9P2M7 1197 aaKnown RBP12.65□□□□□ -0.38
MDC1-207ENST00000492462 HSFX1Q9UBD0 423 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 PCDHB5Q9Y5E4 795 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 OBSL1O75147 1896 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 CACNA1IQ9P0X4 2223 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 COL4A2P08572 1712 aa12.65□□□□□ -0.38
MDC1-207ENST00000492462 PTPRDP23468 1912 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 MIA3Q5JRA6 1907 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 TICRRQ7Z2Z1 1910 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 ANKRD11Q6UB99 2663 aaPredicted RBP12.64□□□□□ -0.39
MDC1-207ENST00000492462 PRR23AA6NEV1 266 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 LRRIQ3A6PVS8 624 aaPredicted RBP12.64□□□□□ -0.39
MDC1-207ENST00000492462 STK25O00506 426 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 PRPF40AO75400 957 aaKnown RBP12.64□□□□□ -0.39
MDC1-207ENST00000492462 RHOBTB3O94955 611 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 NR3C1P04150 777 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 MYL1P05976 194 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 CD72P21854 359 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 CYP2F1P24903 491 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 TUFMP49411 452 aaKnown RBP12.64□□□□□ -0.39
MDC1-207ENST00000492462 MYL6P60660 151 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 PSMC1P62191 440 aaKnown RBP12.64□□□□□ -0.39
MDC1-207ENST00000492462 DLG4P78352 724 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 CYP4F8P98187 520 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 MYL7Q01449 175 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 MYO1EQ12965 1108 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 VITQ6UXI7 678 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 ELSPBP1Q96BH3 223 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 LRRC3BQ96PB8 259 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 ATXN3LQ9H3M9 355 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 SLITRK6Q9H5Y7 841 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 ZFP14Q9HCL3 533 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 CRTAC1Q9NQ79 661 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 ASB3Q9Y575 518 aa12.64□□□□□ -0.39
MDC1-207ENST00000492462 NUP210Q8TEM1 1887 aaPredicted RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 ZNF292O60281 2723 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 GREB1Q4ZG55 1949 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 SHISA7A6NL88 538 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 PDXKO00764 312 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 DCNP07585 359 aaKnown RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 PDGFRBP09619 1106 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 GLULP15104 373 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 HMGA1P17096 107 aaKnown RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 LHX1P48742 406 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 STARD6P59095 220 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 NUCB2P80303 420 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 PNOCQ13519 176 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 MLF2Q15773 248 aaPredicted RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 NFE2Q16621 373 aaPredicted RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 DDR2Q16832 855 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 SLC44A4Q53GD3 710 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 C1orf220Q5T0J3 134 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 TDRD10Q5VZ19 366 aaKnown RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 TMEM150AQ86TG1 271 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 ITIH5Q86UX2 942 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 SLC9A9Q8IVB4 645 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 SMYD4Q8IYR2 804 aaPredicted RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 FMR1NBQ8N0W7 255 aaPredicted RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 GOLGA5Q8TBA6 731 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 PARD3BQ8TEW8 1205 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 C2orf15Q8WU43 125 aaKnown RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 MMS19Q96T76 1030 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 SYT15Q9BQS2 421 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 XYLT2Q9H1B5 865 aa12.63□□□□□ -0.39
MDC1-207ENST00000492462 R3HCC1Q9Y3T6 440 aaKnown RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 MTF2Q9Y483 593 aaPredicted RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 ZNF638Q14966 1978 aaKnown RBP12.63□□□□□ -0.39
MDC1-207ENST00000492462 HEPACAM2A8MVW5 462 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 VNN1O95497 513 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 C4BPAP04003 597 aaKnown RBP12.62□□□□□ -0.39
MDC1-207ENST00000492462 RFX1P22670 979 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 WARSP23381 471 aaKnown RBP12.62□□□□□ -0.39
MDC1-207ENST00000492462 GDI1P31150 447 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 CLDN10P78369 228 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 SMARCB1Q12824 385 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 BIRC3Q13489 604 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 VEPH1Q14D04 833 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 WDR72Q3MJ13 1102 aa12.62□□□□□ -0.39
MDC1-207ENST00000492462 GPR158Q5T848 1215 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms