RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 KRT15P19012 456 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 ADRA1DP25100 572 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 SEPT6Q14141 434 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 METTL24Q5JXM2 366 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 LPCAT2Q7L5N7 544 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 RBM15Q96T37 977 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS8-225ENST00000492449 KANSL2Q9H9L4 492 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 VPS45Q9NRW7 570 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 PSMC3IPQ9P2W1 217 aaPredicted RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 KLHL3Q9UH77 587 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 KLRF2D3W0D1 207 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 K7EPI3 171 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 AQP9O43315 295 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 TPPPO94811 219 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 ENO1P06733 434 aaKnown RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 SRGAP2CP0DJJ0 459 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 SRGAP2BP0DMP2 458 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 MYL2P10916 166 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 ABCB4P21439 1286 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 COMTP21964 271 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 ALDH1A3P47895 512 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 CPA2P48052 419 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 GSSP48637 474 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 MECOMQ03112 1051 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 KCTD21Q4G0X4 260 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 FAM209AQ5JX71 171 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 KRT25Q7Z3Z0 450 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 RTKN2Q8IZC4 609 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 THEMISQ8N1K5 641 aaPredicted RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 LRRC59Q96AG4 307 aaKnown RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 PRPF18Q99633 342 aaKnown RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 TDRD1Q9BXT4 1180 aaKnown RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 TRNAU1APQ9NX07 287 aaKnown RBP10.16□□□□□ -0.78
VPS8-225ENST00000492449 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS8-225ENST00000492449 EXOC7Q9UPT5 735 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 INPP5FQ9Y2H2 1132 aa10.16□□□□□ -0.78
VPS8-225ENST00000492449 HSPA8P11142 646 aaKnown RBP10.15□□□□□ -0.78
VPS8-225ENST00000492449 AOC1P19801 751 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 PHKA1P46020 1223 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 EFTUD2Q15029 972 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS8-225ENST00000492449 DCAF6Q58WW2 860 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 C6orf183Q5T699 404 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 ZNF280DQ6N043 979 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 KBTBD6Q86V97 674 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 ZNF34Q8IZ26 560 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 SLC7A5P1Q8MH63 180 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 SLC25A41Q8N5S1 370 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 PCYOX1LQ8NBM8 494 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 MTMR9Q96QG7 549 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 PSD2Q9BQI7 771 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 MXD3Q9BW11 206 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 INO80BQ9C086 356 aaPredicted RBP10.15□□□□□ -0.78
VPS8-225ENST00000492449 NDEL1Q9GZM8 345 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 CCDC68Q9H2F9 335 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 MAN1C1Q9NR34 630 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 GID8Q9NWU2 228 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 NCKIPSDQ9NZQ3 722 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 ARMCX1Q9P291 453 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 PPME1Q9Y570 386 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 CAPN8A6NHC0 703 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 EML1O00423 815 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 ENDOUP21128 410 aaKnown RBP10.15□□□□□ -0.78
VPS8-225ENST00000492449 HSPA2P54652 639 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 ZNF200P98182 395 aaPredicted RBP10.15□□□□□ -0.78
VPS8-225ENST00000492449 SGO2Q562F6 1265 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 ALYREFQ86V81 257 aaKnown RBP10.15□□□□□ -0.78
VPS8-225ENST00000492449 EXOC8Q8IYI6 725 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 BANPQ8N9N5 519 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 TTC13Q8NBP0 860 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 PSPC1Q8WXF1 523 aaKnown RBP10.15□□□□□ -0.78
VPS8-225ENST00000492449 OTUD5Q96G74 571 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 C9orf72Q96LT7 481 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 RTFDC1Q9BY42 306 aaPredicted RBP10.15□□□□□ -0.78
VPS8-225ENST00000492449 PCDHGB4Q9UN71 923 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 TBX22Q9Y458 520 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 PCDHGB5Q9Y5G0 923 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 AP4B1Q9Y6B7 739 aa10.15□□□□□ -0.78
VPS8-225ENST00000492449 ASTN2O75129 1339 aaPredicted RBP10.15□□□□□ -0.79
VPS8-225ENST00000492449 A0A1W2PPM1 405 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 DCAF8L1A6NGE4 600 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 SLC16A3O15427 465 aaKnown RBP10.14□□□□□ -0.79
VPS8-225ENST00000492449 XPOTO43592 962 aaKnown RBP10.14□□□□□ -0.79
VPS8-225ENST00000492449 TFPTP0C1Z6 253 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 RAG1P15918 1043 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 KRT4P19013 534 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 C21orf59P57076 290 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 E2F2Q14209 437 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 EFHC2Q5JST6 749 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 C11orf74Q86VG3 221 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 PPM1KQ8N3J5 372 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 TTC39CQ8N584 583 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 CCDC89Q8N998 374 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 SLC26A7Q8TE54 656 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 MZB1Q8WU39 189 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 ZNF341Q9BYN7 854 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 DCLK3Q9C098 648 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 GPR88Q9GZN0 384 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 BARHL2Q9NY43 387 aa10.14□□□□□ -0.79
VPS8-225ENST00000492449 TMOD2Q9NZR1 351 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms