RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SYCP3Q8IZU3 236 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 CSGALNACT2Q8N6G5 542 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 PDILTQ8N807 584 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 IQUBQ8NA54 791 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 OR5B17Q8NGF7 314 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 HPS3Q969F9 1004 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 TRMT2BQ96GJ1 504 aaKnown RBP9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 CEP295NLQ96MC4 621 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 SEPT5Q99719 369 aaPredicted RBP9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 FAM83CQ9BQN1 747 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 GZF1Q9H116 711 aaPredicted RBP9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 EPC1Q9H2F5 836 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 ATXN3LQ9H3M9 355 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 C8orf33Q9H7E9 229 aaPredicted RBP9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 MAGEF1Q9HAY2 307 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 KIAA1586Q9HCI6 787 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 PCDHB5Q9Y5E4 795 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 PTPRJQ12913 1337 aa9.01□□□□□ -0.97
SMARCB1-207ENST00000491967 PVALEFA0A1B0GWK0 134 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 GOLGA8IPA6NC78 632 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 ZNF233A6NK53 670 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 GOLGA8JA6NMD2 632 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 KINO60870 393 aaKnown RBP9□□□□□ -0.97
SMARCB1-207ENST00000491967 HUS1O60921 280 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 ZSCAN22P10073 491 aaPredicted RBP9□□□□□ -0.97
SMARCB1-207ENST00000491967 CCNE1P24864 410 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 CTHP32929 405 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 MAGEA11P43364 429 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 CLDN10P78369 228 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 PLCB2Q00722 1185 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 CSTF1Q05048 431 aaKnown RBP9□□□□□ -0.97
SMARCB1-207ENST00000491967 CCINQ13939 588 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 ZNF268Q14587 947 aaPredicted RBP9□□□□□ -0.97
SMARCB1-207ENST00000491967 VEPH1Q14D04 833 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 SURF1Q15526 300 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 DUOXA2Q1HG44 320 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 MGAT5BQ3V5L5 792 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 ARHGAP15Q53QZ3 475 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 RESP18Q5W5W9 173 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 STXBP4Q6ZWJ1 553 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 UNC13DQ70J99 1090 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 MON1AQ86VX9 555 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 CBWD2Q8IUF1 395 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 WDR49Q8IV35 697 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 CMTM8Q8IZV2 173 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 SPEM1Q8N4L4 309 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 CELF5Q8N6W0 485 aaKnown RBP9□□□□□ -0.97
SMARCB1-207ENST00000491967 BPIFB1Q8TDL5 484 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 SCFD1Q8WVM8 642 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 KBTBD7Q8WVZ9 684 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 RUBCNQ92622 972 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 USP13Q92995 863 aaPredicted RBP9□□□□□ -0.97
SMARCB1-207ENST00000491967 CHFRQ96EP1 664 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 FUBP3Q96I24 572 aaKnown RBP eCLIP9□□□□□ -0.97
SMARCB1-207ENST00000491967 FAM84AQ96KN4 292 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 MTMR12Q9C0I1 747 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 PCIF1Q9H4Z3 704 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 LMAN1LQ9HAT1 526 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 AGPAT3Q9NRZ7 376 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 DDX43Q9NXZ2 648 aaKnown RBP9□□□□□ -0.97
SMARCB1-207ENST00000491967 HSPBP1Q9NZL4 362 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 RCOR1Q9UKL0 485 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 PCDHA7Q9UN72 937 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 UBE4BO95155 1302 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 SPAG17Q6Q759 2223 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 ATG2BQ96BY7 2078 aa9□□□□□ -0.97
SMARCB1-207ENST00000491967 SPECC1L-ADORA2AF8WAN1 911 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 TACC1O75410 805 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 TADA3O75528 432 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 STAU1O95793 577 aaKnown RBP8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 F13A1P00488 732 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 CSH1P0DML2 217 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 CSH2P0DML3 217 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 TCF3P15923 654 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 TGM1P22735 817 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 WARSP23381 471 aaKnown RBP8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 CYP2F1P24903 491 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 PCSK1P29120 753 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 NRLP54845 237 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 MCCD1P59942 119 aaPredicted RBP8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 RPL10AP62906 217 aaKnown RBP8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 MYL7Q01449 175 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 TSPY1Q01534 308 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 PSMD6Q15008 389 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 DGKKQ5KSL6 1271 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 FAM26FQ5R3K3 315 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 TXNDC11Q6PKC3 985 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 ERMP1Q7Z2K6 904 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 SYNPOQ8N3V7 929 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 KIAA1958Q8N8K9 716 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 KCNG4Q8TDN1 519 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 GIPC2Q8TF65 315 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 ATRIPQ8WXE1 791 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 DHX58Q96C10 678 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 HPDLQ96IR7 371 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 SPATA17Q96L03 361 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 SLITRK6Q9H5Y7 841 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 FOXD4L1Q9NU39 408 aa8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 ABI2Q9NYB9 513 aaPredicted RBP8.99□□□□□ -0.97
SMARCB1-207ENST00000491967 DLL3Q9NYJ7 618 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms