RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
VTA1-204ENST00000491881 PHKBQ93100 1093 aa4.79□□□□□ -1.64
VTA1-204ENST00000491881 MOGAT1Q96PD6 335 aa4.79□□□□□ -1.64
VTA1-204ENST00000491881 TBCBQ99426 244 aa4.79□□□□□ -1.64
VTA1-204ENST00000491881 NAA15Q9BXJ9 866 aaKnown RBP4.79□□□□□ -1.64
VTA1-204ENST00000491881 ALOXE3Q9BYJ1 711 aa4.79□□□□□ -1.64
VTA1-204ENST00000491881 ZNF518BQ9C0D4 1074 aa4.79□□□□□ -1.64
VTA1-204ENST00000491881 SLC52A1Q9NWF4 448 aa4.79□□□□□ -1.64
VTA1-204ENST00000491881 MAP3K2Q9Y2U5 619 aa4.79□□□□□ -1.64
VTA1-204ENST00000491881 HS3ST4Q9Y661 456 aa4.79□□□□□ -1.64
VTA1-204ENST00000491881 COL4A3Q01955 1670 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 KIAA0355O15063 1070 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 DDX6P26196 483 aaKnown RBP eCLIP4.78□□□□□ -1.64
VTA1-204ENST00000491881 PIK3CBP42338 1070 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 AK2P54819 239 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 TCF15Q12870 199 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 RESTQ13127 1097 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 OS9Q13438 667 aaPredicted RBP4.78□□□□□ -1.64
VTA1-204ENST00000491881 BEAN1Q3B7T3 259 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 LONRF3Q496Y0 759 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 C3orf38Q5JPI3 329 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 LAYNQ6UX15 382 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 SESTD1Q86VW0 696 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 COLGALT2Q8IYK4 626 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 TMEM132CQ8N3T6 1108 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 CCDC33Q8N5R6 958 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 BEND2Q8NDZ0 799 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 CPEB3Q8NE35 698 aaKnown RBP4.78□□□□□ -1.64
VTA1-204ENST00000491881 TMEM125Q96AQ2 219 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 NMD3Q96D46 503 aaKnown RBP4.78□□□□□ -1.64
VTA1-204ENST00000491881 STRBPQ96SI9 672 aaKnown RBP4.78□□□□□ -1.64
VTA1-204ENST00000491881 MPHOSPH6Q99547 160 aaKnown RBP4.78□□□□□ -1.64
VTA1-204ENST00000491881 SPATA5L1Q9BVQ7 753 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 DPH1Q9BZG8 443 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 UNKQ9C0B0 810 aaKnown RBP4.78□□□□□ -1.64
VTA1-204ENST00000491881 TTYH3Q9C0H2 523 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 ZNF700Q9H0M5 742 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 CHST12Q9NRB3 414 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 MRPS18AQ9NVS2 196 aaKnown RBP4.78□□□□□ -1.64
VTA1-204ENST00000491881 ETAA1Q9NY74 926 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 XPR1Q9UBH6 696 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 HESX1Q9UBX0 185 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 PHTF1Q9UMS5 762 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 RAD54BQ9Y620 910 aa4.78□□□□□ -1.64
VTA1-204ENST00000491881 A0A087WWL8 130 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 CCDC78A2IDD5 438 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 TRIM43BA6NCK2 446 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 MARCH11A6NNE9 402 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 CDKL5O76039 1030 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 IL18RAPO95256 599 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 ELANEP08246 267 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 XRCC6P12956 609 aaKnown RBP eCLIP4.77□□□□□ -1.65
VTA1-204ENST00000491881 ITGALP20701 1170 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 VIPR2P41587 438 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 PRIM2P49643 509 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 ANXA11P50995 505 aaKnown RBP4.77□□□□□ -1.65
VTA1-204ENST00000491881 KRTAP10-11P60412 298 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 RPS16P62249 146 aaKnown RBP4.77□□□□□ -1.65
VTA1-204ENST00000491881 MC2RQ01718 297 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 FPGSQ05932 587 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 IQCB1Q15051 598 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 B3GNTL1Q67FW5 361 aaPredicted RBP4.77□□□□□ -1.65
VTA1-204ENST00000491881 TRIM43Q96BQ3 446 aaPredicted RBP4.77□□□□□ -1.65
VTA1-204ENST00000491881 MSLNLQ96KJ4 702 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 SLC46A1Q96NT5 459 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 MYD88Q99836 296 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 ELAC2Q9BQ52 826 aaKnown RBP4.77□□□□□ -1.65
VTA1-204ENST00000491881 HEPHQ9BQS7 1158 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 MS4A7Q9GZW8 240 aaPredicted RBP4.77□□□□□ -1.65
VTA1-204ENST00000491881 GALNT9Q9HCQ5 603 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 A1CFQ9NQ94 594 aaKnown RBP4.77□□□□□ -1.65
VTA1-204ENST00000491881 ZSCAN32Q9NX65 697 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 CTTNBP2NLQ9P2B4 639 aa4.77□□□□□ -1.65
VTA1-204ENST00000491881 TRGV11A0A075B6L2 103 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 PRAMEF33A0A0G2JMD5 474 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 MYADML2A6NDP7 307 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 POM121BA6NF01 834 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 E7ENX8 843 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 PYCARD-AS1I3L0S3 204 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 PRAMEF10O60809 474 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 PEX14O75381 377 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 RASSF9O75901 435 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 SOAT2O75908 522 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 SUN1O94901 812 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 FOSP01100 380 aaPredicted RBP4.76□□□□□ -1.65
VTA1-204ENST00000491881 PARP1P09874 1014 aaKnown RBP4.76□□□□□ -1.65
VTA1-204ENST00000491881 ATXN1LP0C7T5 689 aaKnown RBP4.76□□□□□ -1.65
VTA1-204ENST00000491881 CYP2C9P11712 490 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 CDK4P11802 303 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 FDXRP22570 491 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 KLRC1P26715 233 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 GCLCP48506 637 aaPredicted RBP4.76□□□□□ -1.65
VTA1-204ENST00000491881 RHBDL3P58872 404 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 RPS7P62081 194 aaKnown RBP4.76□□□□□ -1.65
VTA1-204ENST00000491881 GUCY1B3Q02153 619 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 TAP1Q03518 808 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 TAP2Q03519 686 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 ZNF543Q08ER8 600 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 DAG1Q14118 895 aa4.76□□□□□ -1.65
VTA1-204ENST00000491881 CYP2A13Q16696 494 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms