RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 HEPACAM2A8MVW5 462 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 TULP1O00294 542 aaPredicted RBP11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 LAMTOR5O43504 91 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 PSMC3P17980 439 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 ATF6P18850 670 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 CSTF1Q05048 431 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 MTAPQ13126 283 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 MYBPC2Q14324 1141 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 NFKBIBQ15653 356 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 KLHL40Q2TBA0 621 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 SLC39A12Q504Y0 691 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 GAREM2Q75VX8 874 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 NELFCDQ8IXH7 590 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 GUF1Q8N442 669 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 LEMD2Q8NC56 503 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 STKLD1Q8NE28 680 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 SCFD1Q8WVM8 642 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 RUBCNQ92622 972 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 HPS3Q969F9 1004 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 BORCS6Q96GS4 357 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 TRPV4Q9HBA0 871 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 PRMT8Q9NR22 394 aaPredicted RBP11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 DERAQ9Y315 318 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 MYO16Q9Y6X6 1858 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 TPRP12270 2363 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 ACACBO00763 2458 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 PTPRDP23468 1912 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 HELZP42694 1942 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 ANAPC1Q9H1A4 1944 aa11.86□□□□□ -0.51
TMEM39A-211ENST00000491685 GPR179Q6PRD1 2367 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 ZNF233A6NK53 670 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 PDXKO00764 312 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 PSMA7O14818 248 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 PRAMEF12O95522 483 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 FGFR1OPO95684 399 aaKnown RBP11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 CYP11A1P05108 521 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 TDGF1P13385 188 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 SOX9P48436 509 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 EPHB3P54753 998 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 CYP4F8P98187 520 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 PLD1Q13393 1074 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 SURF1Q15526 300 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 CCDC142Q17RM4 750 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 BMT2Q1RMZ1 405 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 COBLL1Q53SF7 1204 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 CCDC183Q5T5S1 534 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 WSCD1Q658N2 575 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 ISM2Q6H9L7 571 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 ZNF852Q6ZMS4 543 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 EPM2AIP1Q7L775 607 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 DNAJB7Q7Z6W7 309 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 LRRTM3Q86VH5 581 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 MLKLQ8NB16 471 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 DEPDC1BQ8WUY9 529 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 PSMG2Q969U7 264 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 SAAL1Q96ER3 474 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 DHTKD1Q96HY7 919 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 ZFYVE19Q96K21 471 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 SEPT5Q99719 369 aaPredicted RBP11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 HINFPQ9BQA5 517 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 ZCWPW1Q9H0M4 648 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 SLITRK6Q9H5Y7 841 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 ASB7Q9H672 318 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 IL21Q9HBE4 155 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 TMLHEQ9NVH6 421 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 DPP3Q9NY33 737 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 FBXO4Q9UKT5 387 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 R3HCC1Q9Y3T6 440 aaKnown RBP11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 C2CD2Q9Y426 696 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 PIAS3Q9Y6X2 628 aa11.85□□□□□ -0.51
TMEM39A-211ENST00000491685 BICDL2A1A5D9 508 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 SLC38A8A6NNN8 435 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 CYB561D2O14569 222 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 EXTL3O43909 919 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 EXOC3O60645 756 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 GABRR2P28476 465 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 HOXC13P31276 330 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 MAGEA9P43362 315 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 RPS9P46781 194 aaKnown RBP11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 ALDH1A3P47895 512 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 GPR15P49685 360 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 TAF6P49848 677 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 GAS6Q14393 721 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 ZNF528Q3MIS6 628 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 CT47A1Q5JQC4 288 aaPredicted RBP11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 TXNDC11Q6PKC3 985 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 ARID3BQ8IVW6 561 aaPredicted RBP11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 MFSD6LQ8IWD5 586 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 GPD1LQ8N335 351 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 XXYLT1Q8NBI6 393 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 GLIS3Q8NEA6 775 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 TTC8Q8TAM2 541 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 GPT2Q8TD30 523 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 NOC3LQ8WTT2 800 aaKnown RBP11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 CACTINQ8WUQ7 758 aaKnown RBP11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 FAM3CQ92520 227 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 NELL1Q92832 810 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 IRF7Q92985 503 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 FAM213AQ9BRX8 229 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 SMG9Q9H0W8 520 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms