RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 MYCT1Q8N699 235 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 SPATA18Q8TC71 538 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 LEO1Q8WVC0 666 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 USP13Q92995 863 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 HVCN1Q96D96 273 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 CALML4Q96GE6 196 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 MYRFLQ96LU7 910 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 CLIC6Q96NY7 704 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 GCNAQ96QF7 691 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 SEPT5Q99719 369 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 STRA6Q9BX79 667 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 ABCB6Q9NP58 842 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 GKN1Q9NS71 199 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 TDP1Q9NUW8 608 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 DPP3Q9NY33 737 aa9.12□□□□□ -0.95
APOBEC3F-204ENST00000491387 CACNA1GO43497 2377 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 A0A087X0B3 334 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 OTOL1A6NHN0 477 aaPredicted RBP9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 KPNA7A9QM74 516 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 ANKRD63C9JTQ0 380 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 RPP40O75818 363 aaKnown RBP9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 PPP1R37O75864 691 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 IL18RAPO95256 599 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 CSH1P0DML2 217 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 CSH2P0DML3 217 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 TCF3P15923 654 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 PLCG1P19174 1290 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 DRD1P21728 446 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 ADSSP30520 456 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 LONP1P36776 959 aaKnown RBP9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 AVPR1AP37288 418 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 UBA7P41226 1012 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 PNPLA4P41247 253 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 ACOT2P49753 483 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 POSTNQ15063 836 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 PDGFRLQ15198 375 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 NFE2Q16621 373 aaPredicted RBP9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 ST3GAL2Q16842 350 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 WSCD1Q658N2 575 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 ADALQ6DHV7 355 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 CRELD2Q6UXH1 353 aaPredicted RBP9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 ZNF720Q7Z2F6 126 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 GPIHBP1Q8IV16 184 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 KIAA1958Q8N8K9 716 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 TTC8Q8TAM2 541 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 CXorf38Q8TB03 319 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 RAD54LQ92698 747 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 TRMT2BQ96GJ1 504 aaKnown RBP9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 EPSTI1Q96J88 318 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 FAM84AQ96KN4 292 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 PKMYT1Q99640 499 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 ACBD6Q9BR61 282 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 PYM1Q9BRP8 204 aaKnown RBP9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 EBF1Q9UH73 591 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 AGO2Q9UKV8 859 aaKnown RBP9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 CCL26Q9Y258 94 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 PCDHB5Q9Y5E4 795 aa9.11□□□□□ -0.95
APOBEC3F-204ENST00000491387 TBCAO75347 108 aaKnown RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 NOL4O94818 638 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 SYT1P21579 422 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 NMT1P30419 496 aaKnown RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 HOXC13P31276 330 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 DDIT3P35638 169 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 CDR1P51861 262 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 SV2CQ496J9 727 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 PLK5Q496M5 336 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 FOXD4L5Q5VV16 416 aaPredicted RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 SCARA3Q6AZY7 606 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 IL31Q6EBC2 164 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 SYT13Q7L8C5 426 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 KBTBD6Q86V97 674 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 EFCAB13Q8IY85 973 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 TMEM86AQ8N2M4 240 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 ZSWIM2Q8NEG5 633 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 RIN3Q8TB24 985 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 GIPC2Q8TF65 315 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 FOXD4L4Q8WXT5 416 aaPredicted RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 LARP4BQ92615 738 aaKnown RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 MRPS31Q92665 395 aaKnown RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 EXOC4Q96A65 974 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 FAM212AQ96EL1 285 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 CHAMP1Q96JM3 812 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 CEP295NLQ96MC4 621 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 ZNF560Q96MR9 790 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 LSM14BQ9BX40 385 aaKnown RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 FGFBP2Q9BYJ0 223 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 SMG9Q9H0W8 520 aaKnown RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 ARRDC1-AS1Q9H2J1 176 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 EBF3Q9H4W6 596 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 TMEM206Q9H813 350 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 UPF2Q9HAU5 1272 aaKnown RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 VPS45Q9NRW7 570 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 TMLHEQ9NVH6 421 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 GDAP2Q9NXN4 497 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 SEL1LQ9UBV2 794 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 FBXO2Q9UK22 296 aaPredicted RBP9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 SLC8A2Q9UPR5 921 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 MTMR6Q9Y217 621 aa9.1□□□□□ -0.95
APOBEC3F-204ENST00000491387 MYOFQ9NZM1 2061 aa9.09□□□□□ -0.95
APOBEC3F-204ENST00000491387 CFAP47Q6ZTR5 3102 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms