RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 RSRC2Q7L4I2 434 aaKnown RBP14.75□□□□□ -0.05
SMPD4-219ENST00000491128 TMCO2Q7Z6W1 182 aaPredicted RBP14.75□□□□□ -0.05
SMPD4-219ENST00000491128 HES6Q96HZ4 224 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 ZNF560Q96MR9 790 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 RGS18Q9NS28 235 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 RBM12Q9NTZ6 932 aaKnown RBP14.75□□□□□ -0.05
SMPD4-219ENST00000491128 PCDHGC3Q9UN70 934 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 DYNC1I1O14576 645 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 ZNF623O75123 536 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 DDHD2O94830 711 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 VDRP11473 427 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 PBX3P40426 434 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 BCAR1P56945 870 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 OGDHQ02218 1023 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 SV2CQ496J9 727 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 PMF1Q6P1K2 205 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 DSTYKQ6XUX3 929 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 TRIM72Q6ZMU5 477 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 SLC24A5Q71RS6 500 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 ZNF598Q86UK7 904 aaKnown RBP14.75□□□□□ -0.05
SMPD4-219ENST00000491128 SYCE1Q8N0S2 351 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 GOLGA1Q92805 767 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 ACSF2Q96CM8 615 aaPredicted RBP14.75□□□□□ -0.05
SMPD4-219ENST00000491128 B3GNT5Q9BYG0 378 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 HIPK3Q9H422 1215 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 KLHL11Q9NVR0 708 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 DNAJB4Q9UDY4 337 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 CEP83Q9Y592 693 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 MED7O43513 233 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 TKTP29401 623 aaKnown RBP14.74□□□□□ -0.05
SMPD4-219ENST00000491128 LRPAP1P30533 357 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 TAF5Q15542 800 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 CNGA2Q16280 664 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 UPP1Q16831 310 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 LIN9Q5TKA1 542 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 SPATA4Q8NEY3 305 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 JOSD2Q8TAC2 188 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 SLC2A14Q8TDB8 520 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 HDAC7Q8WUI4 952 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 ZNF333Q96JL9 665 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 WNT8AQ9H1J5 351 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 PRG3Q9Y2Y8 225 aaPredicted RBP14.74□□□□□ -0.05
SMPD4-219ENST00000491128 NR2E1Q9Y466 385 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 F8VP50 259 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 MYO1FO00160 1098 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 UPP2O95045 317 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 RPLP2P05387 115 aaKnown RBP14.74□□□□□ -0.05
SMPD4-219ENST00000491128 SLC7A5Q01650 507 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 PDCLQ13371 301 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 ATP13A4Q4VNC1 1196 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 PAWRQ96IZ0 340 aaKnown RBP14.74□□□□□ -0.05
SMPD4-219ENST00000491128 SLC38A7Q9NVC3 462 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 GDAP2Q9NXN4 497 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 UVRAGQ9P2Y5 699 aa14.74□□□□□ -0.05
SMPD4-219ENST00000491128 E5RJQ4 531 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 ENPP3O14638 875 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 RFC1P35251 1148 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-219ENST00000491128 RAB27AP51159 221 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
SMPD4-219ENST00000491128 PDE4CQ08493 712 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 RAB6CQ53S08 254 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 DNAJC24Q6P3W2 148 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 DCUN1D2Q6PH85 259 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 SCUBE3Q8IX30 993 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 USP38Q8NB14 1042 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 NDRG1Q92597 394 aaKnown RBP14.73□□□□□ -0.05
SMPD4-219ENST00000491128 PNKPQ96T60 521 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 RHOBTB2Q9BYZ6 727 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 MIS12Q9H081 205 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 RAB6CQ9H0N0 254 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 DDX43Q9NXZ2 648 aaKnown RBP14.73□□□□□ -0.05
SMPD4-219ENST00000491128 GABBR2O75899 941 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 BEST1O76090 585 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 LSM8O95777 96 aaKnown RBP14.73□□□□□ -0.05
SMPD4-219ENST00000491128 HSPA8P11142 646 aaKnown RBP14.73□□□□□ -0.05
SMPD4-219ENST00000491128 PRLRP16471 622 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 PNPLA4P41247 253 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 ZNF252P-AS1Q0IIN9 211 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 BFSP2Q13515 415 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 PLEKHA7Q6IQ23 1121 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 KLHL7Q8IXQ5 586 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 CLEC4CQ8WTT0 213 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 PGBD4Q96DM1 585 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 C18orf8Q96DM3 657 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 ANKZF1Q9H8Y5 726 aa14.73□□□□□ -0.05
SMPD4-219ENST00000491128 METTL5Q9NRN9 209 aaKnown RBP14.73□□□□□ -0.05
SMPD4-219ENST00000491128 NT5C1B-RDH14C9J2C7 533 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 PYGMP11217 842 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 PAFAH1B1P43034 410 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 TAS2R40P59535 323 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 RNASELQ05823 741 aaKnown RBP14.72□□□□□ -0.05
SMPD4-219ENST00000491128 MDH1BQ5I0G3 518 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 FBXO38Q6PIJ6 1188 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 LCLAT1Q6UWP7 414 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 CD300LGQ6UXG3 332 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 CTU1Q7Z7A3 348 aaKnown RBP14.72□□□□□ -0.05
SMPD4-219ENST00000491128 FEZF2Q8TBJ5 459 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 B3GALT6Q96L58 329 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 TMEM209Q96SK2 561 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 PARD6BQ9BYG5 372 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms