RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	ZFYVE27	Q5T4F4	411 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	ERMARD	Q5T6L9	678 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	DCAF12L1	Q5VU92	463 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	NAA35	Q5VZE5	725 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	IQSEC1	Q6DN90	963 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	CRELD2	Q6UXH1	353 aa	Predicted RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	GADL1	Q6ZQY3	521 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	ARC	Q7LC44	396 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	TADA2B	Q86TJ2	420 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	RPAIN	Q86UA6	219 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	ZCCHC9	Q8N567	271 aa	Known RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	RNF149	Q8NC42	400 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	CCDC197	Q8NCU1	140 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	PPTC7	Q8NI37	304 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	OLIG1	Q8TAK6	271 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	STK32A	Q8WU08	396 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	DYDC1	Q8WWB3	177 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	RIN2	Q8WYP3	895 aa	Predicted RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	BSND	Q8WZ55	320 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	NKD2	Q969F2	451 aa	Predicted RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	TMEM143	Q96AN5	459 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	THAP11	Q96EK4	314 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	CYFIP2	Q96F07	1278 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	CCDC114	Q96M63	670 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	POP1	Q99575	1024 aa	Known RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	TARS2	Q9BW92	718 aa	Known RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	DCLK3	Q9C098	648 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	CCDC113	Q9H0I3	377 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	DPH5	Q9H2P9	285 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	RSAD1	Q9HA92	442 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	PTPRH	Q9HD43	1115 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	TOPORS	Q9NS56	1045 aa	Predicted RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	CISH	Q9NSE2	258 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	ANKFY1	Q9P2R3	1169 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	GMPR2	Q9P2T1	348 aa	Known RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	SLC12A6	Q9UHW9	1150 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	TPX2	Q9ULW0	747 aa	Known RBP	6.69	□□□□□ -1.34
FN1-223	ENST00000490833	ZNF148	Q9UQR1	794 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	SNX24	Q9Y343	169 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	SNCAIP	Q9Y6H5	919 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	FAM169A	Q9Y6X4	670 aa		6.69	□□□□□ -1.34
FN1-223	ENST00000490833	RBM47	A0AV96	593 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	FAM181B	A6NEQ2	426 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	CFAP73	A6NFT4	308 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	HNRNPCL1	O60812	293 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	SUN1	O94901	812 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	FSBP	O95073	299 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	CD4	P01730	458 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	GNAT1	P11488	350 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ATP4A	P20648	1035 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ALDH3A1	P30838	453 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	HPD	P32754	393 aa	Predicted RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	SSR1	P43307	286 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ACADSB	P45954	432 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	RPL21	P46778	160 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	GABRB2	P47870	512 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	RASSF2	P50749	326 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	GTF2A2	P52657	109 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ZNF135	P52742	658 aa	Predicted RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	YARS	P54577	528 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	SARNP	P82979	210 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	SP2	Q02086	613 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	KLF1	Q13351	362 aa	Predicted RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ZNF211	Q13398	564 aa	Predicted RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	KLHL38	Q2WGJ6	581 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ZNF568	Q3ZCX4	644 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	TTC31	Q49AM3	519 aa	Predicted RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	TNFAIP8L3	Q5GJ75	292 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	SPDYA	Q5MJ70	313 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	KCTD16	Q68DU8	428 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	EFCAB12	Q6NXP0	572 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	CCDC62	Q6P9F0	684 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	RNF19B	Q6ZMZ0	732 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	TAS1R3	Q7RTX0	852 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	UNC93A	Q86WB7	457 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	PSTK	Q8IV42	348 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	GSPT2	Q8IYD1	628 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	PDIK1L	Q8N165	341 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	NME8	Q8N427	588 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	FAM160A2	Q8N612	972 aa	Predicted RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	UBR7	Q8N806	425 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	MYCBPAP	Q8TBZ2	947 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ASAP3	Q8TDY4	903 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ZNF473	Q8WTR7	871 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ATXN2L	Q8WWM7	1075 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	CPA5	Q8WXQ8	436 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	USP6NL	Q92738	828 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	KRT35	Q92764	455 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	LRRC39	Q96DD0	335 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	SLC10A4	Q96EP9	437 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	ACAP3	Q96P50	834 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	XPO6	Q96QU8	1125 aa	Known RBP	6.68	□□□□□ -1.34
FN1-223	ENST00000490833	BCO2	Q9BYV7	579 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	TRIM31	Q9BZY9	425 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	PCDH9	Q9HC56	1237 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	SPON1	Q9HCB6	807 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	TOR4A	Q9NXH8	423 aa		6.68	□□□□□ -1.34
FN1-223	ENST00000490833	SMARCAL1	Q9NZC9	954 aa		6.68	□□□□□ -1.34

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