RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 DMPKQ09013 629 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 MFSD5Q6N075 450 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 CGB2Q6NT52 195 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 MOB2Q70IA6 237 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 C14orf80Q86SX3 495 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 SCUBE1Q8IWY4 988 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 ANKRD35Q8N283 1001 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 PPFIBP2Q8ND30 876 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 LMO3Q8TAP4 145 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 PLEKHO2Q8TD55 490 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 SYT11Q9BT88 431 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 CENPOQ9BU64 300 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 TMEM109Q9BVC6 243 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 DENND2DQ9H6A0 471 aaPredicted RBP10.69□□□□□ -0.7
BRD9-209ENST00000490814 KCNH7Q9NS40 1196 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 ARHGEF38Q9NXL2 777 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 PDP2Q9P2J9 529 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 STOML1Q9UBI4 398 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 ZNF148Q9UQR1 794 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 PCDHA3Q9Y5H8 950 aa10.69□□□□□ -0.7
BRD9-209ENST00000490814 GLTPD2A6NH11 291 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 WNT10BO00744 389 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 HNRNPDLO14979 420 aaKnown RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 GGPS1O95749 300 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 UBTFL6P0CB48 400 aaPredicted RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 MYCLP1P12525 358 aaPredicted RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 SKIP12755 728 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 TNNI1P19237 187 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 NSFP46459 744 aaKnown RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 FOXD4Q12950 439 aaPredicted RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 PPP2R5CQ13362 524 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 IZUMO3Q5VZ72 239 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 FAAH2Q6GMR7 532 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 DUS1LQ6P1R4 473 aaKnown RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 LDHDQ86WU2 507 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 SCYL3Q8IZE3 742 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 VPS52Q8N1B4 723 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 STMN2Q93045 179 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 MCUR1Q96AQ8 359 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 GMCL1Q96IK5 515 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 ZDHHC15Q96MV8 337 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 SPATA16Q9BXB7 569 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 SAYSD1Q9NPB0 183 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 CHKBQ9Y259 395 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 DENND3A2RUS2 1198 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 ATP9AO75110 1047 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 TTC4O95801 387 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 ITGA2BP08514 1039 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 CCNB1P14635 433 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 ARPC4P59998 168 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 KRT39Q6A163 491 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 CYFIP1Q7L576 1253 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 PEX5LQ8IYB4 626 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 CHURC1Q8WUH1 139 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 ACSF2Q96CM8 615 aaPredicted RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 GRAMD1AQ96CP6 724 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 CATSPER2Q96P56 530 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 DDX50Q9BQ39 737 aaKnown RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 FAM213AQ9BRX8 229 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 MIS12Q9H081 205 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 PRKAG3Q9UGI9 489 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 ZFP69BQ9UJL9 534 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 GTF3C4Q9UKN8 822 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 SPATA31D3P0C874 917 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 RFX1P22670 979 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 CA4P22748 312 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 TAF1BQ53T94 588 aaPredicted RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 SNX30Q5VWJ9 437 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 SPATA31D4Q6ZUB0 917 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 RBBP8NLQ8NC74 664 aaPredicted RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 SREK1Q8WXA9 508 aaKnown RBP10.68□□□□□ -0.7
BRD9-209ENST00000490814 NCSTNQ92542 709 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 UBN1Q9NPG3 1134 aa10.68□□□□□ -0.7
BRD9-209ENST00000490814 CFAP69A5D8W1 941 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 DCTN3O75935 186 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 ASLP04424 464 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 P4HBP07237 508 aaKnown RBP10.67□□□□□ -0.7
BRD9-209ENST00000490814 ZCCHC18P0CG32 403 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 ETS2P15036 469 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 ITIH2P19823 946 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 YWHABP31946 246 aaKnown RBP10.67□□□□□ -0.7
BRD9-209ENST00000490814 CDR2Q01850 454 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 NSUN2Q08J23 767 aaKnown RBP eCLIP10.67□□□□□ -0.7
BRD9-209ENST00000490814 KRT72Q14CN4 511 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 WDR75Q8IWA0 830 aaKnown RBP10.67□□□□□ -0.7
BRD9-209ENST00000490814 GPC2Q8N158 579 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 IL31RAQ8NI17 732 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 ASAP3Q8TDY4 903 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 USP33Q8TEY7 942 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 RBM15Q96T37 977 aaKnown RBP eCLIP10.67□□□□□ -0.72e-8■□□□□ 9.1
BRD9-209ENST00000490814 LRMDAQ9H2I8 198 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 NPHS2Q9NP85 383 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 C1orf112Q9NSG2 853 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 NMRK1Q9NWW6 199 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 GPRC5DQ9NZD1 345 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 NINJ2Q9NZG7 142 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 NOCTQ9UK39 431 aaKnown RBP10.67□□□□□ -0.7
BRD9-209ENST00000490814 LRCH1Q9Y2L9 728 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 MAGEA13PA6NCF6 341 aa10.67□□□□□ -0.7
BRD9-209ENST00000490814 FAM47DPA6NHR8 397 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms