RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 L1RE1Q9UN81 338 aa21.2■□□□□ 0.98
SREBF1-216ENST00000490796 SNX9Q9Y5X1 595 aa21.2■□□□□ 0.98
SREBF1-216ENST00000490796 TSC2P49815 1807 aa21.2■□□□□ 0.98
SREBF1-216ENST00000490796 A0A087X0B3 334 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 MYBPHLA2RUH7 354 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 ZNF233A6NK53 670 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 LILRB5O75023 590 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 PRAMEF12O95522 483 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 TNNC2P02585 160 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 DDX6P26196 483 aaKnown RBP eCLIP21.19■□□□□ 0.985e-6■■■■■ 29.6
SREBF1-216ENST00000490796 WNT7BP56706 349 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 SURF1Q15526 300 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 CMTM8Q8IZV2 173 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 SPEM1Q8N4L4 309 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 RMDN1Q96DB5 314 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 SLC46A2Q9BY10 475 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 MTMR12Q9C0I1 747 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 SMG9Q9H0W8 520 aaKnown RBP21.19■□□□□ 0.98
SREBF1-216ENST00000490796 CUEDC2Q9H467 287 aa21.19■□□□□ 0.98
SREBF1-216ENST00000490796 UXTQ9UBK9 157 aaPredicted RBP21.19■□□□□ 0.98
SREBF1-216ENST00000490796 ACAT1P24752 427 aaKnown RBP21.18■□□□□ 0.98
SREBF1-216ENST00000490796 PCSK1P29120 753 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 CTHP32929 405 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 LHX1P48742 406 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 ASIC1P78348 528 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 ITPRIPL2Q3MIP1 535 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 DGLUCYQ7Z3D6 616 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 SPATA2LQ8IUW3 424 aaPredicted RBP21.18■□□□□ 0.98
SREBF1-216ENST00000490796 ADGRF2Q8IZF7 708 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 MAB21L3Q8N8X9 362 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 LINC00301Q8NCQ3 95 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 LRRC3BQ96PB8 259 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 FGFBP2Q9BYJ0 223 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 RBM12Q9NTZ6 932 aaKnown RBP21.18■□□□□ 0.98
SREBF1-216ENST00000490796 TMLHEQ9NVH6 421 aa21.18■□□□□ 0.98
SREBF1-216ENST00000490796 TFIP11Q9UBB9 837 aaKnown RBP21.18■□□□□ 0.98
SREBF1-216ENST00000490796 PPP6R2O75170 966 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 NLRP12P59046 1061 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 SATB1Q01826 763 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 PUM1Q14671 1186 aaKnown RBP eCLIP21.17■□□□□ 0.98
SREBF1-216ENST00000490796 PON2Q15165 354 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 INTS6LQ5JSJ4 861 aaKnown RBP21.17■□□□□ 0.98
SREBF1-216ENST00000490796 CC2D1AQ6P1N0 951 aaPredicted RBP21.17■□□□□ 0.98
SREBF1-216ENST00000490796 TOP6BLQ8N6T0 577 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 IQUBQ8NA54 791 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 SPATA18Q8TC71 538 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 LEO1Q8WVC0 666 aaPredicted RBP21.17■□□□□ 0.98
SREBF1-216ENST00000490796 DHX58Q96C10 678 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 BACH2Q9BYV9 841 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 KIAA1586Q9HCI6 787 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 ABCB6Q9NP58 842 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 GKN1Q9NS71 199 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 GDAP2Q9NXN4 497 aa21.17■□□□□ 0.98
SREBF1-216ENST00000490796 HSP90AA1P07900 732 aaKnown RBP21.16■□□□□ 0.98
SREBF1-216ENST00000490796 GPR15P49685 360 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 TNK2Q07912 1038 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 DDR2Q16832 855 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 DUOXA2Q1HG44 320 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 SDHAF4Q5VUM1 108 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 LMBRD2Q68DH5 695 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-216ENST00000490796 PRR23BQ6ZRT6 265 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 FAM84AQ96KN4 292 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 KIF9Q9HAQ2 790 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 INTS13Q9NVM9 706 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 GTF3C4Q9UKN8 822 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 USP18Q9UMW8 372 aa21.16■□□□□ 0.98
SREBF1-216ENST00000490796 NUP210Q8TEM1 1887 aaPredicted RBP21.15■□□□□ 0.98
SREBF1-216ENST00000490796 COL4A2P08572 1712 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 FRYLO94915 3013 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 CUTAO60888 179 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 F11P03951 625 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 HMGA1P17096 107 aaKnown RBP21.15■□□□□ 0.98
SREBF1-216ENST00000490796 SDHBP21912 280 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 CYP2F1P24903 491 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 AMPD2Q01433 879 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 FOXD4L5Q5VV16 416 aaPredicted RBP21.15■□□□□ 0.98
SREBF1-216ENST00000490796 TXNDC8Q6A555 127 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 TXNDC11Q6PKC3 985 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 SCN4BQ8IWT1 228 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 SYNPOQ8N3V7 929 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 TTC16Q8NEE8 873 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 FOXD4L4Q8WXT5 416 aaPredicted RBP21.15■□□□□ 0.98
SREBF1-216ENST00000490796 HPS3Q969F9 1004 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 HPDLQ96IR7 371 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 TRIM9Q9C026 710 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 TDP1Q9NUW8 608 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 KBTBD4Q9NVX7 518 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 HSPBP1Q9NZL4 362 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 CACNA1AO00555 2505 aa21.15■□□□□ 0.98
SREBF1-216ENST00000490796 SOBPA7XYQ1 873 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 EIF3DO15371 548 aaKnown RBP eCLIP21.14■□□□□ 0.97
SREBF1-216ENST00000490796 YEATS4O95619 227 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 TDGF1P13385 188 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 LPAL2Q16609 132 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 C4orf50Q6ZRC1 276 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 Q6ZS52 159 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 DPH6Q7L8W6 267 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 MON1AQ86VX9 555 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 CBWD2Q8IUF1 395 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 STKLD1Q8NE28 680 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms