RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 SIX4Q9UIU6 781 aa22.54■■□□□ 1.2
SYNE4-205ENST00000490730 ZNF638Q14966 1978 aaKnown RBP22.53■■□□□ 1.2
SYNE4-205ENST00000490730 SPECC1L-ADORA2AF8WAN1 911 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 KIAA0391O15091 583 aaKnown RBP22.53■■□□□ 1.2
SYNE4-205ENST00000490730 CUTAO60888 179 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 TNNC2P02585 160 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 CHRNB1P11230 501 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 AVPR1AP37288 418 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 AMPD3Q01432 767 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 LRRC32Q14392 662 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 INTS6LQ5JSJ4 861 aaKnown RBP22.53■■□□□ 1.2
SYNE4-205ENST00000490730 CBWD2Q8IUF1 395 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 MAB21L3Q8N8X9 362 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 IQUBQ8NA54 791 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 ZBTB44Q8NCP5 570 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 ACBD6Q9BR61 282 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 IER2Q9BTL4 223 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 SLC46A2Q9BY10 475 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 CUEDC2Q9H467 287 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 RBM12Q9NTZ6 932 aaKnown RBP22.53■■□□□ 1.2
SYNE4-205ENST00000490730 KBTBD4Q9NVX7 518 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 THG1LQ9NWX6 298 aaKnown RBP22.53■■□□□ 1.2
SYNE4-205ENST00000490730 HSPBP1Q9NZL4 362 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 DENND4CQ5VZ89 1909 aa22.53■■□□□ 1.2
SYNE4-205ENST00000490730 OBSL1O75147 1896 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 ZNF233A6NK53 670 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 YEATS4O95619 227 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 CYP2F1P24903 491 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 CTHP32929 405 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 CCR3P51677 355 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 MLLT6P55198 1093 aaPredicted RBP22.52■■□□□ 1.2
SYNE4-205ENST00000490730 NLRP12P59046 1061 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 TNK2Q07912 1038 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 MYO1EQ12965 1108 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 DDR2Q16832 855 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 C1orf228Q6PIY5 440 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 TXNDC11Q6PKC3 985 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 OSTM1Q86WC4 334 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 HSCBQ8IWL3 235 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 CMTM8Q8IZV2 173 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 CELF5Q8N6W0 485 aaKnown RBP22.52■■□□□ 1.2
SYNE4-205ENST00000490730 CXorf38Q8TB03 319 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 INTS13Q9NVM9 706 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 GDAP2Q9NXN4 497 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 GTF3C4Q9UKN8 822 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 SMG5Q9UPR3 1016 aaKnown RBP22.52■■□□□ 1.2
SYNE4-205ENST00000490730 PTPRJQ12913 1337 aa22.52■■□□□ 1.2
SYNE4-205ENST00000490730 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.51■■□□□ 1.19
SYNE4-205ENST00000490730 HCRTO43612 131 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 CSH1P0DML2 217 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 CSH2P0DML3 217 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 HMGA1P17096 107 aaKnown RBP22.51■■□□□ 1.19
SYNE4-205ENST00000490730 NRLP54845 237 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 RPL10AP62906 217 aaKnown RBP22.51■■□□□ 1.19
SYNE4-205ENST00000490730 PLCB2Q00722 1185 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 PON2Q15165 354 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 CCDC142Q17RM4 750 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 FAM26FQ5R3K3 315 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 SHC4Q6S5L8 630 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 RALGPS2Q86X27 583 aaPredicted RBP22.51■■□□□ 1.19
SYNE4-205ENST00000490730 SPATA2LQ8IUW3 424 aaPredicted RBP22.51■■□□□ 1.19
SYNE4-205ENST00000490730 TOP6BLQ8N6T0 577 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 OR5B17Q8NGF7 314 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 LEO1Q8WVC0 666 aaPredicted RBP22.51■■□□□ 1.19
SYNE4-205ENST00000490730 NELL1Q92832 810 aa22.51■■□□□ 1.19
SYNE4-205ENST00000490730 FAM126AQ9BYI3 521 aaPredicted RBP22.51■■□□□ 1.19
SYNE4-205ENST00000490730 GPR179Q6PRD1 2367 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 MYBPHLA2RUH7 354 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 PCSK1P29120 753 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 WEE1P30291 646 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 CXCL12P48061 93 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 LHX1P48742 406 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 SATB1Q01826 763 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 SURF1Q15526 300 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 SOWAHAQ2M3V2 549 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 TXNDC8Q6A555 127 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 TMEM150AQ86TG1 271 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 RDH13Q8NBN7 331 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 TTC16Q8NEE8 873 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 MRPS31Q92665 395 aaKnown RBP22.5■■□□□ 1.19
SYNE4-205ENST00000490730 SECISBP2LQ93073 1101 aaKnown RBP22.5■■□□□ 1.19
SYNE4-205ENST00000490730 HPDLQ96IR7 371 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 EPC1Q9H2F5 836 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 ABCB6Q9NP58 842 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 ZMYM5Q9UJ78 669 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 CCL26Q9Y258 94 aa22.5■■□□□ 1.19
SYNE4-205ENST00000490730 DCHS1Q96JQ0 3298 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 EIF3DO15371 548 aaKnown RBP eCLIP22.49■■□□□ 1.19
SYNE4-205ENST00000490730 POLR2DO15514 142 aaKnown RBP22.49■■□□□ 1.19
SYNE4-205ENST00000490730 LILRB5O75023 590 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 F11P03951 625 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 DDX6P26196 483 aaKnown RBP eCLIP22.49■■□□□ 1.19
SYNE4-205ENST00000490730 CASP1P29466 404 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 HOXD13P35453 343 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 CYP2J2P51589 502 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 GAS6Q14393 721 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 DUOXA2Q1HG44 320 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 ITPRIPL2Q3MIP1 535 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 Q6ZS52 159 aa22.49■■□□□ 1.19
SYNE4-205ENST00000490730 SCN4BQ8IWT1 228 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms