RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 SNX16P57768 344 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 CYP27A1Q02318 531 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 TBX2Q13207 712 aaPredicted RBP11.64□□□□□ -0.55
VARS2-210ENST00000490699 INTS6LQ5JSJ4 861 aaKnown RBP11.64□□□□□ -0.55
VARS2-210ENST00000490699 RTP2Q5QGT7 225 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 PPP1R2P3Q6NXS1 205 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 CD300LGQ6UXG3 332 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 TRIM72Q6ZMU5 477 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 LIMS2Q7Z4I7 341 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 ACOT1Q86TX2 421 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 CRYBG2Q8N1P7 616 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 C2orf15Q8WU43 125 aaKnown RBP11.64□□□□□ -0.55
VARS2-210ENST00000490699 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 NOX5Q96PH1 765 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 DNAJC7Q99615 494 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 ZBP1Q9H171 429 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 SDCBP2Q9H190 292 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 PRO3102Q9H379 93 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 CHST7Q9NS84 486 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 AIPL1Q9NZN9 384 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 MTRRQ9UBK8 725 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 DPP7Q9UHL4 492 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 CNTN6Q9UQ52 1028 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 TSC2P49815 1807 aa11.64□□□□□ -0.55
VARS2-210ENST00000490699 CYP11B1P15538 503 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 TNFAIP3P21580 790 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 ACAT1P24752 427 aaKnown RBP11.63□□□□□ -0.55
VARS2-210ENST00000490699 RAD23BP54727 409 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 PSMC1P62191 440 aaKnown RBP11.63□□□□□ -0.55
VARS2-210ENST00000490699 MDH1BQ5I0G3 518 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 ZNF697Q5TEC3 545 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 PLPP4Q5VZY2 271 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 SCARA3Q6AZY7 606 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 PRSS55Q6UWB4 352 aaPredicted RBP11.63□□□□□ -0.55
VARS2-210ENST00000490699 CYP26C1Q6V0L0 522 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 CCDC186Q7Z3E2 898 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 RNF168Q8IYW5 571 aaPredicted RBP11.63□□□□□ -0.55
VARS2-210ENST00000490699 TXLNBQ8N3L3 684 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 UBR7Q8N806 425 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 SLC4A11Q8NBS3 891 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 MYCBPAPQ8TBZ2 947 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 SPPL3Q8TCT6 385 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 B3GALT6Q96L58 329 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 CCDC42Q96M95 316 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.63□□□□□ -0.55
VARS2-210ENST00000490699 ELOVL4Q9GZR5 314 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 CERS4Q9HA82 394 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 FNIP2Q9P278 1114 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 AJAP1Q9UKB5 411 aaPredicted RBP11.63□□□□□ -0.55
VARS2-210ENST00000490699 MAFFQ9ULX9 164 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 PCDHB5Q9Y5E4 795 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 CDY1Q9Y6F8 540 aa11.63□□□□□ -0.55
VARS2-210ENST00000490699 AKR1B10O60218 316 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 CSPG5O95196 566 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 LINC00271P0C7V0 271 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 FAM200BP0CF97 657 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 PNMA6AP0CW24 399 aaPredicted RBP11.62□□□□□ -0.55
VARS2-210ENST00000490699 SRGAP2BP0DMP2 458 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 LMO2P25791 158 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 KLRC2P26717 231 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 HNRNPH3P31942 346 aaKnown RBP11.62□□□□□ -0.55
VARS2-210ENST00000490699 OR1D2P34982 312 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 CYLC1P35663 651 aaPredicted RBP11.62□□□□□ -0.55
VARS2-210ENST00000490699 PRKCIP41743 596 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 ZNF132P52740 706 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 BCAT1P54687 386 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 ORC1Q13415 861 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 MRPL58Q14197 206 aaKnown RBP11.62□□□□□ -0.55
VARS2-210ENST00000490699 PTPN14Q15678 1187 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 SLC39A12Q504Y0 691 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 KIAA0319Q5VV43 1072 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 TPGS2Q68CL5 300 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 DPY19L2P1Q6NXN4 242 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 TAS1R1Q7RTX1 841 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 SLC47A2Q86VL8 602 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 OSTM1Q86WC4 334 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 TMTC1Q8IUR5 882 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 LNX1Q8TBB1 728 aaPredicted RBP11.62□□□□□ -0.55
VARS2-210ENST00000490699 SPPL2BQ8TCT7 592 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 TRIM44Q96DX7 344 aaPredicted RBP11.62□□□□□ -0.55
VARS2-210ENST00000490699 CYFIP2Q96F07 1278 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 SMARCD1Q96GM5 515 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 FUBP3Q96I24 572 aaKnown RBP eCLIP11.62□□□□□ -0.55
VARS2-210ENST00000490699 BAG1Q99933 345 aaPredicted RBP11.62□□□□□ -0.55
VARS2-210ENST00000490699 GPR88Q9GZN0 384 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 MIS12Q9H081 205 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 ZCWPW1Q9H0M4 648 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 ZNF576Q9H609 170 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 FAM49BQ9NUQ9 324 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 ABI2Q9NYB9 513 aaPredicted RBP11.62□□□□□ -0.55
VARS2-210ENST00000490699 HMGXB4Q9UGU5 601 aa11.62□□□□□ -0.55
VARS2-210ENST00000490699 PLXNA4Q9HCM2 1894 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 SSU72P8A0A1W2PR75 194 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 M0QYV0 167 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 PRRG1O14668 218 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 SNPHO15079 494 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 GRM6O15303 877 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 LSM8O95777 96 aaKnown RBP11.61□□□□□ -0.55
VARS2-210ENST00000490699 EFEMP2O95967 443 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 SETSIPP0DME0 302 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms