RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 RFWD2Q8NHY2 731 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 OPTNQ96CV9 577 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 EDF1O60869 148 aaKnown RBP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 SHMT1P34896 483 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 FAAP100Q0VG06 881 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 SHROOM1Q2M3G4 852 aaPredicted RBP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 ZNF667Q5HYK9 610 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 DSTYKQ6XUX3 929 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 OTOP1Q7RTM1 612 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 TRABD2AQ86V40 505 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 SESTD1Q86VW0 696 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 CDR2LQ86X02 465 aaPredicted RBP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 CLPTM1LQ96KA5 538 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 KCNG1Q9UIX4 513 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 LZTS1Q9Y250 596 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 M0QYV0 167 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 M0R2N6 131 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 ELK3P41970 407 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 CASP2P42575 452 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 FMO1Q01740 532 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 TTLL12Q14166 644 aaPredicted RBP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 PRR5LQ6MZQ0 368 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 MFSD5Q6N075 450 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 C1orf186Q6ZWK4 172 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 ZFPM1Q8IX07 1006 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 CXorf38Q8TB03 319 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 MPP4Q96JB8 637 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 LRMDAQ9H2I8 198 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 MRPL46Q9H2W6 279 aaKnown RBP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 POLLQ9UGP5 575 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 P4HA1P13674 534 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 COPAP53621 1224 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 MORF4L2Q15014 288 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 EFTUD2Q15029 972 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 WDR72Q3MJ13 1102 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 MAB21L3Q8N8X9 362 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 DTNBP1Q96EV8 351 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 TARS2Q9BW92 718 aaKnown RBP13.42□□□□□ -0.26
SHOX2-205ENST00000490689 SLC17A7Q9P2U7 560 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 DTNAQ9Y4J8 743 aa13.42□□□□□ -0.26
SHOX2-205ENST00000490689 MRC1P22897 1456 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 F8VP50 259 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 MEIS2O14770 477 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 MED7O43513 233 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 PSAPP07602 524 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 TPBGLP0DKB5 382 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 SP100P23497 879 aaPredicted RBP13.41□□□□□ -0.26
SHOX2-205ENST00000490689 TBXAS1P24557 533 aaPredicted RBP13.41□□□□□ -0.26
SHOX2-205ENST00000490689 CLNKQ7Z7G1 428 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 EME1Q96AY2 570 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 SLC24A2Q9UI40 661 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 STXBP5LQ9Y2K9 1186 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 DDTLA6NHG4 134 aaPredicted RBP13.41□□□□□ -0.26
SHOX2-205ENST00000490689 E7ENQ6 273 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 RGS7P49802 495 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 SPOCD1Q6ZMY3 1216 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 TMPRSS6Q8IU80 811 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 ZCCHC9Q8N567 271 aaKnown RBP13.41□□□□□ -0.26
SHOX2-205ENST00000490689 EXD1Q8NHP7 514 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 FAXDC2Q96IV6 333 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 AGAP3Q96P47 875 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 DHX35Q9H5Z1 703 aaKnown RBP13.41□□□□□ -0.26
SHOX2-205ENST00000490689 SIX2Q9NPC8 291 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 PICK1Q9NRD5 415 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 POLRMTO00411 1230 aaKnown RBP13.41□□□□□ -0.26
SHOX2-205ENST00000490689 PSTPIP1O43586 416 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 NPTX2P47972 431 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 TFDP3Q5H9I0 405 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 PPP1R2P3Q6NXS1 205 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 SLC51AQ86UW1 340 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 AFAP1L2Q8N4X5 818 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 GCNAQ96QF7 691 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 KCND2Q9NZV8 630 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 DNAJC16Q9Y2G8 782 aa13.41□□□□□ -0.26
SHOX2-205ENST00000490689 FSCN2O14926 492 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 JAK3P52333 1124 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 WDR4P57081 412 aaKnown RBP13.4□□□□□ -0.26
SHOX2-205ENST00000490689 RPL10AP62906 217 aaKnown RBP13.4□□□□□ -0.26
SHOX2-205ENST00000490689 SLC25A3Q00325 362 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 SLFN12LQ6IEE8 588 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 ALYREFQ86V81 257 aaKnown RBP13.4□□□□□ -0.26
SHOX2-205ENST00000490689 MXRA8Q9BRK3 442 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 CAAP1Q9H8G2 361 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 ASNSD1Q9NWL6 643 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 PIH1D1Q9NWS0 290 aaKnown RBP13.4□□□□□ -0.26
SHOX2-205ENST00000490689 PCDHA10Q9Y5I2 948 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 NFAT5O94916 1531 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 GOLGA8QA0A0J9YX86 632 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 GOLGA8OA6NCC3 632 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 GOLGA8NF8WBI6 632 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 TAS2R40P59535 323 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 CDK16Q00536 496 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 PARP6Q2NL67 630 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 Q4G0T1 1027 aa13.4□□□□□ -0.26
SHOX2-205ENST00000490689 FAM160B2Q86V87 743 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms