RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 CSH1P0DML2 217 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 CSH2P0DML3 217 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 FNTBP49356 437 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 CASP5P51878 434 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 ATXN1P54253 815 aaKnown RBP16.86■□□□□ 0.29
NUP58-213ENST00000490231 DMWDQ09019 674 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 SIM2Q14190 667 aaPredicted RBP16.86■□□□□ 0.29
NUP58-213ENST00000490231 PRR23BQ6ZRT6 265 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 SYCP3Q8IZU3 236 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 CXorf38Q8TB03 319 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 SPATA18Q8TC71 538 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 SMG9Q9H0W8 520 aaKnown RBP16.86■□□□□ 0.29
NUP58-213ENST00000490231 GDAP2Q9NXN4 497 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 DDX43Q9NXZ2 648 aaKnown RBP16.86■□□□□ 0.29
NUP58-213ENST00000490231 ITGA11Q9UKX5 1188 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 CDV3Q9UKY7 258 aaKnown RBP16.86■□□□□ 0.29
NUP58-213ENST00000490231 L1RE1Q9UN81 338 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 ANK1P16157 1881 aa16.86■□□□□ 0.29
NUP58-213ENST00000490231 F5P12259 2224 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 EXTL3O43909 919 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 HUS1O60921 280 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 PRPF40AO75400 957 aaKnown RBP16.85■□□□□ 0.29
NUP58-213ENST00000490231 IDEP14735 1019 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 SYT1P21579 422 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 STAT6P42226 847 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 MYL7Q01449 175 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 SPEM2Q0P670 501 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 BFSP1Q12934 665 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 LPAL2Q16609 132 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 INTS6LQ5JSJ4 861 aaKnown RBP16.85■□□□□ 0.29
NUP58-213ENST00000490231 FAM173BQ6P4H8 233 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 MAB21L3Q8N8X9 362 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 ZSWIM2Q8NEG5 633 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 MRPS31Q92665 395 aaKnown RBP16.85■□□□□ 0.29
NUP58-213ENST00000490231 USP13Q92995 863 aaPredicted RBP16.85■□□□□ 0.29
NUP58-213ENST00000490231 PKMYT1Q99640 499 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 RTKNQ9BST9 563 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 PI4K2AQ9BTU6 479 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 TMEM206Q9H813 350 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 GKN1Q9NS71 199 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 TDP1Q9NUW8 608 aa16.85■□□□□ 0.29
NUP58-213ENST00000490231 UXTQ9UBK9 157 aaPredicted RBP16.85■□□□□ 0.29
NUP58-213ENST00000490231 GPR15P49685 360 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 RPL10AP62906 217 aaKnown RBP16.84■□□□□ 0.29
NUP58-213ENST00000490231 RBP5P82980 135 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 CEBPZQ03701 1054 aaKnown RBP16.84■□□□□ 0.29
NUP58-213ENST00000490231 RUNX3Q13761 415 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 ZNF268Q14587 947 aaPredicted RBP16.84■□□□□ 0.29
NUP58-213ENST00000490231 SLC39A14Q15043 492 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 MON1AQ86VX9 555 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 WDR5BQ86VZ2 330 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 CSGALNACT2Q8N6G5 542 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 TOP6BLQ8N6T0 577 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 TRMT2BQ96GJ1 504 aaKnown RBP16.84■□□□□ 0.29
NUP58-213ENST00000490231 MYRFLQ96LU7 910 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 CBWD1Q9BRT8 395 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 HPS4Q9NQG7 708 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 PANK4Q9NVE7 773 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 C2orf42Q9NWW7 574 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 MAGED2Q9UNF1 606 aaPredicted RBP16.84■□□□□ 0.29
NUP58-213ENST00000490231 CCL26Q9Y258 94 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 SCN1AP35498 2009 aa16.84■□□□□ 0.29
NUP58-213ENST00000490231 GOLGA8IPA6NC78 632 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 GOLGA8JA6NMD2 632 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 TRDMT1O14717 391 aaKnown RBP16.83■□□□□ 0.28
NUP58-213ENST00000490231 GABRDO14764 452 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
NUP58-213ENST00000490231 NOL4O94818 638 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 LHX1P48742 406 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 AMPD2Q01433 879 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 CFAP221Q4G0U5 840 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 TMEM196Q5HYL7 178 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 TXNDC8Q6A555 127 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 GPD1LQ8N335 351 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 INTS4Q96HW7 963 aaKnown RBP16.83■□□□□ 0.28
NUP58-213ENST00000490231 FUBP3Q96I24 572 aaKnown RBP eCLIP16.83■□□□□ 0.28
NUP58-213ENST00000490231 USP28Q96RU2 1077 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 FGFBP2Q9BYJ0 223 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 PDE11AQ9HCR9 933 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 SIX4Q9UIU6 781 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 SNX9Q9Y5X1 595 aa16.83■□□□□ 0.28
NUP58-213ENST00000490231 A0A087X0B3 334 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 CCDC163A0A0D9SF12 145 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
NUP58-213ENST00000490231 KRT19P08727 400 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 TMEM191BP0C7N4 346 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 ACAT1P24752 427 aaKnown RBP16.82■□□□□ 0.28
NUP58-213ENST00000490231 CYP2F1P24903 491 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 PCSK1P29120 753 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 GRSF1Q12849 480 aaKnown RBP eCLIP16.82■□□□□ 0.28
NUP58-213ENST00000490231 SRSF5Q13243 272 aaKnown RBP16.82■□□□□ 0.28
NUP58-213ENST00000490231 PDGFRLQ15198 375 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 CSRP2Q16527 193 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 DDR2Q16832 855 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 SDHAF4Q5VUM1 108 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 HEATR6Q6AI08 1181 aaKnown RBP16.82■□□□□ 0.28
NUP58-213ENST00000490231 SCARA3Q6AZY7 606 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 TRIM68Q6AZZ1 485 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 FSTL4Q6MZW2 842 aa16.82■□□□□ 0.28
NUP58-213ENST00000490231 CC2D1AQ6P1N0 951 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms