RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TNNC1P63316 161 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 BIRC3Q13489 604 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 SNW1Q13573 536 aaKnown RBP21.16■□□□□ 0.98
SMC4-222ENST00000490207 GRM2Q14416 872 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 MLF2Q15773 248 aaPredicted RBP21.16■□□□□ 0.98
SMC4-222ENST00000490207 CCDC142Q17RM4 750 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 ARHGAP15Q53QZ3 475 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 STXBP5Q5T5C0 1151 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 PHLDB3Q6NSJ2 640 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 PARD3BQ8TEW8 1205 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 SHDQ96IW2 340 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 SYT15Q9BQS2 421 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 TRPV4Q9HBA0 871 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 ABCB6Q9NP58 842 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 GTF3C4Q9UKN8 822 aa21.16■□□□□ 0.98
SMC4-222ENST00000490207 PHACTR2O75167 634 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 CLSTN1O94985 981 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 STAU1O95793 577 aaKnown RBP21.15■□□□□ 0.98
SMC4-222ENST00000490207 CDC25CP30307 473 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 GPR15P49685 360 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 AP3M2P53677 418 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 PSMC1P62191 440 aaKnown RBP21.15■□□□□ 0.98
SMC4-222ENST00000490207 PRKCQQ04759 706 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 TDRD10Q5VZ19 366 aaKnown RBP21.15■□□□□ 0.98
SMC4-222ENST00000490207 CEP135Q66GS9 1140 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 VITQ6UXI7 678 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 SPATA2LQ8IUW3 424 aaPredicted RBP21.15■□□□□ 0.98
SMC4-222ENST00000490207 FMR1NBQ8N0W7 255 aaPredicted RBP21.15■□□□□ 0.98
SMC4-222ENST00000490207 DEPDC1BQ8WUY9 529 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 SYAP1Q96A49 352 aaPredicted RBP21.15■□□□□ 0.98
SMC4-222ENST00000490207 CDH9Q9ULB4 789 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 MAPK8IP1Q9UQF2 711 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 TRAF3IP3Q9Y228 551 aa21.15■□□□□ 0.98
SMC4-222ENST00000490207 NCANO14594 1321 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 CYP2F1P24903 491 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 LMO2P25791 158 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 ATICP31939 592 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 VIPR2P41587 438 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 STARD6P59095 220 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 MYL6P60660 151 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 RPL10AP62906 217 aaKnown RBP21.14■□□□□ 0.97
SMC4-222ENST00000490207 CYP4F8P98187 520 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 PNOCQ13519 176 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 WDR72Q3MJ13 1102 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 SLC44A4Q53GD3 710 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 GPR158Q5T848 1215 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 C4orf50Q6ZRC1 276 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 CCDC105Q8IYK2 499 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 GUF1Q8N442 669 aaKnown RBP21.14■□□□□ 0.97
SMC4-222ENST00000490207 STKLD1Q8NE28 680 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 DNASE1L2Q92874 299 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 E2F7Q96AV8 911 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 FUBP3Q96I24 572 aaKnown RBP eCLIP21.14■□□□□ 0.97
SMC4-222ENST00000490207 MRPL45Q9BRJ2 306 aaKnown RBP21.14■□□□□ 0.97
SMC4-222ENST00000490207 TRMT61BQ9BVS5 477 aaKnown RBP21.14■□□□□ 0.97
SMC4-222ENST00000490207 BRD9Q9H8M2 597 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 IL21Q9HBE4 155 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 FRMD4BQ9Y2L6 1034 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 GREB1Q4ZG55 1949 aa21.14■□□□□ 0.97
SMC4-222ENST00000490207 MYBPHLA2RUH7 354 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 HEPACAM2A8MVW5 462 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 TACC1O75410 805 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 PSMC3P17980 439 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 NR2F2P24468 414 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 CLDN10P78369 228 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 NFIL3Q16649 462 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 ZNF699Q32M78 642 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 CFAP221Q4G0U5 840 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 SDHAF4Q5VUM1 108 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 FAM171BQ6P995 826 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 MYLPFQ96A32 169 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 MKNK1Q9BUB5 465 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 FOXQ1Q9C009 403 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 XYLT2Q9H1B5 865 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 IRF2BPLQ9H1B7 796 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 SNX25Q9H3E2 840 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 CRTAC1Q9NQ79 661 aa21.13■□□□□ 0.97
SMC4-222ENST00000490207 ZNF638Q14966 1978 aaKnown RBP21.13■□□□□ 0.97
SMC4-222ENST00000490207 KIF26AQ9ULI4 1882 aaPredicted RBP21.13■□□□□ 0.97
SMC4-222ENST00000490207 ATP2C2O75185 946 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 PDGFRBP09619 1106 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 CSH1P0DML2 217 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 CSH2P0DML3 217 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 HMGA1P17096 107 aaKnown RBP21.12■□□□□ 0.97
SMC4-222ENST00000490207 GDI1P31150 447 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 DLG4P78352 724 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 FAM160A1Q05DH4 1040 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 MAPRE1Q15691 268 aaKnown RBP21.12■□□□□ 0.97
SMC4-222ENST00000490207 DDR2Q16832 855 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 TPRG1Q6ZUI0 275 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 MFSD6LQ8IWD5 586 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 DTWD2Q8NBA8 298 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 PJA1Q8NG27 643 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 OR6B3Q8NGW1 331 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 TMC2Q8TDI7 906 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 DDX23Q9BUQ8 820 aaKnown RBP21.12■□□□□ 0.97
SMC4-222ENST00000490207 VRTNQ9H8Y1 702 aa21.12■□□□□ 0.97
SMC4-222ENST00000490207 NXF1Q9UBU9 619 aaKnown RBP21.12■□□□□ 0.97
SMC4-222ENST00000490207 MAGED2Q9UNF1 606 aaPredicted RBP21.12■□□□□ 0.97
SMC4-222ENST00000490207 SIT1Q9Y3P8 196 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms