RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 P2RY13Q9BPV8 354 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 KIF9Q9HAQ2 790 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.09■□□□□ 0.01
VARS-227ENST00000489979 CPSF3Q9UKF6 684 aaKnown RBP15.09■□□□□ 0.01
VARS-227ENST00000489979 TBX20Q9UMR3 447 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 ATRXP46100 2492 aa15.09■□□□□ 0.01
VARS-227ENST00000489979 KIAA1549LQ6ZVL6 1849 aa15.08■□□□□ 0.01
VARS-227ENST00000489979 THADAQ6YHU6 1953 aa15.08■□□□□ 0
VARS-227ENST00000489979 A0A0B4J269 797 aa15.08■□□□□ 0
VARS-227ENST00000489979 BCLAF3A2AJT9 711 aaKnown RBP15.08■□□□□ 0
VARS-227ENST00000489979 K7ENM7 598 aa15.08■□□□□ 0
VARS-227ENST00000489979 APBB3O95704 486 aa15.08■□□□□ 0
VARS-227ENST00000489979 PIGRP01833 764 aa15.08■□□□□ 0
VARS-227ENST00000489979 GJA4P35212 333 aa15.08■□□□□ 0
VARS-227ENST00000489979 GPR15P49685 360 aa15.08■□□□□ 0
VARS-227ENST00000489979 SMARCB1Q12824 385 aa15.08■□□□□ 0
VARS-227ENST00000489979 FOXC1Q12948 553 aa15.08■□□□□ 0
VARS-227ENST00000489979 KARSQ15046 597 aaKnown RBP15.08■□□□□ 0
VARS-227ENST00000489979 PDGFRLQ15198 375 aa15.08■□□□□ 0
VARS-227ENST00000489979 FBXO43Q4G163 708 aa15.08■□□□□ 0
VARS-227ENST00000489979 WSCD1Q658N2 575 aa15.08■□□□□ 0
VARS-227ENST00000489979 SYT13Q7L8C5 426 aa15.08■□□□□ 0
VARS-227ENST00000489979 STKLD1Q8NE28 680 aa15.08■□□□□ 0
VARS-227ENST00000489979 MRPS31Q92665 395 aaKnown RBP15.08■□□□□ 0
VARS-227ENST00000489979 CDK5RAP3Q96JB5 506 aa15.08■□□□□ 0
VARS-227ENST00000489979 PYM1Q9BRP8 204 aaKnown RBP15.08■□□□□ 0
VARS-227ENST00000489979 SH2B1Q9NRF2 756 aaPredicted RBP15.08■□□□□ 0
VARS-227ENST00000489979 EBF1Q9UH73 591 aa15.08■□□□□ 0
VARS-227ENST00000489979 ZMIZ1Q9ULJ6 1067 aa15.08■□□□□ 0
VARS-227ENST00000489979 MAGED2Q9UNF1 606 aaPredicted RBP15.08■□□□□ 0
VARS-227ENST00000489979 DERAQ9Y315 318 aa15.08■□□□□ 0
VARS-227ENST00000489979 TAF6P49848 677 aa15.07■□□□□ 0
VARS-227ENST00000489979 ZNF252P-AS1Q0IIN9 211 aa15.07■□□□□ 0
VARS-227ENST00000489979 PSMD2Q13200 908 aa15.07■□□□□ 0
VARS-227ENST00000489979 DMC1Q14565 340 aa15.07■□□□□ 0
VARS-227ENST00000489979 TMEM119Q4V9L6 283 aa15.07■□□□□ 0
VARS-227ENST00000489979 SDHAF4Q5VUM1 108 aa15.07■□□□□ 0
VARS-227ENST00000489979 DAB2IPQ5VWQ8 1189 aa15.07■□□□□ 0
VARS-227ENST00000489979 SLC39A4Q6P5W5 647 aa15.07■□□□□ 0
VARS-227ENST00000489979 MON1AQ86VX9 555 aa15.07■□□□□ 0
VARS-227ENST00000489979 DCP1BQ8IZD4 617 aaKnown RBP15.07■□□□□ 0
VARS-227ENST00000489979 CPA6Q8N4T0 437 aa15.07■□□□□ 0
VARS-227ENST00000489979 KCTD17Q8N5Z5 321 aa15.07■□□□□ 0
VARS-227ENST00000489979 MYCT1Q8N699 235 aa15.07■□□□□ 0
VARS-227ENST00000489979 EZH1Q92800 747 aaPredicted RBP15.07■□□□□ 0
VARS-227ENST00000489979 CD101Q93033 1021 aa15.07■□□□□ 0
VARS-227ENST00000489979 EXOC4Q96A65 974 aa15.07■□□□□ 0
VARS-227ENST00000489979 REEP2Q9BRK0 252 aa15.07■□□□□ 0
VARS-227ENST00000489979 ECT2Q9H8V3 914 aa15.07■□□□□ 0
VARS-227ENST00000489979 TMLHEQ9NVH6 421 aa15.07■□□□□ 0
VARS-227ENST00000489979 INVSQ9Y283 1065 aa15.07■□□□□ 0
VARS-227ENST00000489979 PCDHB5Q9Y5E4 795 aa15.07■□□□□ 0
VARS-227ENST00000489979 IGF2RP11717 2491 aa15.07■□□□□ 0
VARS-227ENST00000489979 LNP1A1A4G5 178 aa15.06■□□□□ 0
VARS-227ENST00000489979 SOBPA7XYQ1 873 aa15.06■□□□□ 0
VARS-227ENST00000489979 ZZEF1O43149 2961 aa15.06■□□□□ 0
VARS-227ENST00000489979 SPINK2P20155 84 aa15.06■□□□□ 0
VARS-227ENST00000489979 GBP1P32455 592 aa15.06■□□□□ 0
VARS-227ENST00000489979 ACOT2P49753 483 aa15.06■□□□□ 0
VARS-227ENST00000489979 DGKEP52429 567 aa15.06■□□□□ 0
VARS-227ENST00000489979 ATP2C1P98194 919 aaPredicted RBP15.06■□□□□ 0
VARS-227ENST00000489979 ZNF268Q14587 947 aaPredicted RBP15.06■□□□□ 0
VARS-227ENST00000489979 MTF1Q14872 753 aa15.06■□□□□ 0
VARS-227ENST00000489979 SH3PXD2AQ5TCZ1 1133 aa15.06■□□□□ 0
VARS-227ENST00000489979 KDF1Q8NAX2 398 aaPredicted RBP15.06■□□□□ 0
VARS-227ENST00000489979 TTC16Q8NEE8 873 aa15.06■□□□□ 0
VARS-227ENST00000489979 OSCP1Q8WVF1 389 aa15.06■□□□□ 0
VARS-227ENST00000489979 ACDQ96AP0 544 aa15.06■□□□□ 0
VARS-227ENST00000489979 PI4K2AQ9BTU6 479 aa15.06■□□□□ 0
VARS-227ENST00000489979 ASB7Q9H672 318 aa15.06■□□□□ 0
VARS-227ENST00000489979 DUS2Q9NX74 493 aaKnown RBP15.06■□□□□ 0
VARS-227ENST00000489979 DPP3Q9NY33 737 aa15.06■□□□□ 0
VARS-227ENST00000489979 ODF2LQ9ULJ1 636 aa15.06■□□□□ 0
VARS-227ENST00000489979 C2CD2Q9Y426 696 aa15.06■□□□□ 0
VARS-227ENST00000489979 VWA3AA6NCI4 1184 aa15.05■□□□□ -0
VARS-227ENST00000489979 ANKRD63C9JTQ0 380 aa15.05■□□□□ -0
VARS-227ENST00000489979 PRPF40AO75400 957 aaKnown RBP15.05■□□□□ -0
VARS-227ENST00000489979 TADA3O75528 432 aa15.05■□□□□ -0
VARS-227ENST00000489979 FAM13AO94988 1023 aa15.05■□□□□ -0
VARS-227ENST00000489979 TOP3BO95985 862 aaKnown RBP15.05■□□□□ -0
VARS-227ENST00000489979 CSH1P0DML2 217 aa15.05■□□□□ -0
VARS-227ENST00000489979 CSH2P0DML3 217 aa15.05■□□□□ -0
VARS-227ENST00000489979 FAM160A1Q05DH4 1040 aa15.05■□□□□ -0
VARS-227ENST00000489979 COL9A2Q14055 689 aaPredicted RBP15.05■□□□□ -0
VARS-227ENST00000489979 DHX8Q14562 1220 aaKnown RBP15.05■□□□□ -0
VARS-227ENST00000489979 ZNF77Q15935 545 aa15.05■□□□□ -0
VARS-227ENST00000489979 GPBP1Q86WP2 473 aa15.05■□□□□ -0
VARS-227ENST00000489979 CCSER1Q9C0I3 900 aa15.05■□□□□ -0
VARS-227ENST00000489979 PARVGQ9HBI0 331 aa15.05■□□□□ -0
VARS-227ENST00000489979 TRPC7Q9HCX4 862 aa15.05■□□□□ -0
VARS-227ENST00000489979 WASF3Q9UPY6 502 aa15.05■□□□□ -0
VARS-227ENST00000489979 WNT6Q9Y6F9 365 aa15.05■□□□□ -0
VARS-227ENST00000489979 SPEGQ15772 3267 aa15.05■□□□□ -0
VARS-227ENST00000489979 WDFY3Q8IZQ1 3526 aa15.05■□□□□ -0
VARS-227ENST00000489979 ZFYVE26Q68DK2 2539 aa15.04■□□□□ -0
VARS-227ENST00000489979 ASCC3Q8N3C0 2202 aaKnown RBP15.04■□□□□ -0
VARS-227ENST00000489979 ANAPC1Q9H1A4 1944 aa15.04■□□□□ -0
VARS-227ENST00000489979 KPNA7A9QM74 516 aa15.04■□□□□ -0
VARS-227ENST00000489979 TISP43B9A030 160 aa15.04■□□□□ -0
VARS-227ENST00000489979 KHNYNO15037 678 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms