RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ZNF560Q96MR9 790 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 PI4K2AQ9BTU6 479 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 STRA6Q9BX79 667 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 TDP1Q9NUW8 608 aa17.1■□□□□ 0.33
PLOD3-216ENST00000489927 MAGED2Q9UNF1 606 aaPredicted RBP17.1■□□□□ 0.33
PLOD3-216ENST00000489927 KMT2BQ9UMN6 2715 aaPredicted RBP17.09■□□□□ 0.33
PLOD3-216ENST00000489927 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
PLOD3-216ENST00000489927 PRPF40AO75400 957 aaKnown RBP17.09■□□□□ 0.33
PLOD3-216ENST00000489927 TFAMQ00059 246 aaKnown RBP17.09■□□□□ 0.33
PLOD3-216ENST00000489927 TSPY1Q01534 308 aa17.09■□□□□ 0.33
PLOD3-216ENST00000489927 GRSF1Q12849 480 aaKnown RBP eCLIP17.09■□□□□ 0.33
PLOD3-216ENST00000489927 POSTNQ15063 836 aa17.09■□□□□ 0.33
PLOD3-216ENST00000489927 SDHAF4Q5VUM1 108 aa17.09■□□□□ 0.33
PLOD3-216ENST00000489927 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
PLOD3-216ENST00000489927 ZSWIM2Q8NEG5 633 aa17.09■□□□□ 0.33
PLOD3-216ENST00000489927 HVCN1Q96D96 273 aa17.09■□□□□ 0.33
PLOD3-216ENST00000489927 FAM213AQ9BRX8 229 aa17.09■□□□□ 0.33
PLOD3-216ENST00000489927 MRPL44Q9H9J2 332 aaKnown RBP17.09■□□□□ 0.33
PLOD3-216ENST00000489927 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.09■□□□□ 0.33
PLOD3-216ENST00000489927 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
PLOD3-216ENST00000489927 AXIN1O15169 862 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 FOXD2O60548 495 aaPredicted RBP17.08■□□□□ 0.32
PLOD3-216ENST00000489927 RPP40O75818 363 aaKnown RBP17.08■□□□□ 0.32
PLOD3-216ENST00000489927 KRT37O76014 449 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 ITGB3P05106 788 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 CSH1P0DML2 217 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 CSH2P0DML3 217 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 ARSAP15289 507 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 POLR2BP30876 1174 aaKnown RBP17.08■□□□□ 0.32
PLOD3-216ENST00000489927 PNPLA4P41247 253 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 CCDC6Q16204 474 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 NFE2Q16621 373 aaPredicted RBP17.08■□□□□ 0.32
PLOD3-216ENST00000489927 SCARA3Q6AZY7 606 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 MON1AQ86VX9 555 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 GAB3Q8WWW8 586 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 MRPS31Q92665 395 aaKnown RBP17.08■□□□□ 0.32
PLOD3-216ENST00000489927 SAAL1Q96ER3 474 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 FAM84AQ96KN4 292 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 ARRDC1-AS1Q9H2J1 176 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 KIF9Q9HAQ2 790 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 FBRSL1Q9HCM7 1045 aaKnown RBP17.08■□□□□ 0.32
PLOD3-216ENST00000489927 TBC1D7Q9P0N9 293 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 L1RE1Q9UN81 338 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 AGAP1Q9UPQ3 857 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 TCHHQ07283 1943 aa17.08■□□□□ 0.32
PLOD3-216ENST00000489927 ACACBO00763 2458 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 CCDC163A0A0D9SF12 145 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 ATG13O75143 517 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 RNF40O75150 1001 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 TADA3O75528 432 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 EGFP01133 1207 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 ACAT1P24752 427 aaKnown RBP17.07■□□□□ 0.32
PLOD3-216ENST00000489927 CYP2F1P24903 491 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 SF3A2Q15428 464 aaKnown RBP17.07■□□□□ 0.32
PLOD3-216ENST00000489927 DDR2Q16832 855 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 L1TD1Q5T7N2 865 aaKnown RBP17.07■□□□□ 0.32
PLOD3-216ENST00000489927 NAIF1Q69YI7 327 aaPredicted RBP17.07■□□□□ 0.32
PLOD3-216ENST00000489927 CC2D1AQ6P1N0 951 aaPredicted RBP17.07■□□□□ 0.32
PLOD3-216ENST00000489927 KBTBD6Q86V97 674 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 BRSK2Q8IWQ3 736 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 C1orf127Q8N9H9 656 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 LEO1Q8WVC0 666 aaPredicted RBP17.07■□□□□ 0.32
PLOD3-216ENST00000489927 ACBD6Q9BR61 282 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 POLR3BQ9NW08 1133 aaPredicted RBP17.07■□□□□ 0.32
PLOD3-216ENST00000489927 DDX43Q9NXZ2 648 aaKnown RBP17.07■□□□□ 0.32
PLOD3-216ENST00000489927 SEL1LQ9UBV2 794 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 STK17AQ9UEE5 414 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 SLC8A2Q9UPR5 921 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 CLIC4Q9Y696 253 aa17.07■□□□□ 0.32
PLOD3-216ENST00000489927 MYMKA6NI61 221 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 HUS1O60921 280 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 NOL4O94818 638 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 RAP1GAPP47736 663 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 GALK1P51570 392 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 CASP5P51878 434 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 AMPD2Q01433 879 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 ZNF268Q14587 947 aaPredicted RBP17.06■□□□□ 0.32
PLOD3-216ENST00000489927 CCDC142Q17RM4 750 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 AASDHQ4L235 1098 aaPredicted RBP17.06■□□□□ 0.32
PLOD3-216ENST00000489927 INTS6LQ5JSJ4 861 aaKnown RBP17.06■□□□□ 0.32
PLOD3-216ENST00000489927 CACNA2D4Q7Z3S7 1137 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 CXorf38Q8TB03 319 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 DNAJC19Q96DA6 116 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 LOXL4Q96JB6 756 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 ACCSQ96QU6 501 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 PKMYT1Q99640 499 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 ABCB6Q9NP58 842 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 RXFP3Q9NSD7 469 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 RBAKQ9NYW8 714 aaPredicted RBP17.06■□□□□ 0.32
PLOD3-216ENST00000489927 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 FBXO2Q9UK22 296 aaPredicted RBP17.06■□□□□ 0.32
PLOD3-216ENST00000489927 GTF3C4Q9UKN8 822 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 EXOC7Q9UPT5 735 aa17.06■□□□□ 0.32
PLOD3-216ENST00000489927 TPRP12270 2363 aaKnown RBP17.06■□□□□ 0.32
PLOD3-216ENST00000489927 VPS37CA5D8V6 355 aaPredicted RBP17.05■□□□□ 0.32
PLOD3-216ENST00000489927 HCRTO43612 131 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 EPN2O95208 641 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 GCNT3O95395 438 aa17.05■□□□□ 0.32
PLOD3-216ENST00000489927 ZNF806P0C7X5 589 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms