RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TMEM233B4DJY2 109 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 ADM5C9JUS6 153 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 BTN3A1O00481 513 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 PEX1O43933 1283 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 RHOBTB3O94955 611 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 ELFN1P0C7U0 828 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 EN2P19622 333 aaPredicted RBP6.52□□□□□ -1.37
CCDC39-206ENST00000489868 ITGALP20701 1170 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 SLC7A1P30825 629 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 LILRA4P59901 499 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 MRPS35P82673 323 aaKnown RBP6.52□□□□□ -1.37
CCDC39-206ENST00000489868 SP2Q02086 613 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 DNAJC5GQ8N7S2 189 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 PDLIM2Q96JY6 352 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 FAM204AQ9H8W3 233 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 SERHLQ9NQF3 203 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 CPNE7Q9UBL6 633 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 DMTF1Q9Y222 760 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 ADGRA2Q96PE1 1338 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 ZBED1O96006 694 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 HRGP04196 525 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 CHRM2P08172 466 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 CD6P30203 668 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 PTH2RP49190 550 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 MAPK10P53779 464 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 TXNRD1Q16881 649 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 PRR16Q569H4 304 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 CCDC149Q6ZUS6 474 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 ZNF280BQ86YH2 543 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 SLC15A4Q8N697 577 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 B3GALNT2Q8NCR0 500 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 ACTRT2Q8TDY3 377 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 FBXL20Q96IG2 436 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 ACTRT3Q9BYD9 372 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 TPSD1Q9BZJ3 242 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 SLITRK6Q9H5Y7 841 aa6.51□□□□□ -1.37
CCDC39-206ENST00000489868 KIAA0355O15063 1070 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 MPPED1O15442 326 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 TRIAP1O43715 76 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 SOAT2O75908 522 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 ERBB2P04626 1255 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 RHCEP18577 417 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 VIPR2P41587 438 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 RHDQ02161 417 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 IQCB1Q15051 598 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 ZIK1Q3SY52 487 aaPredicted RBP6.5□□□□□ -1.37
CCDC39-206ENST00000489868 ZNF362Q5T0B9 420 aaPredicted RBP6.5□□□□□ -1.37
CCDC39-206ENST00000489868 RNF220Q5VTB9 566 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 ZNF783Q6ZMS7 281 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 PEG10Q86TG7 708 aaKnown RBP6.5□□□□□ -1.37
CCDC39-206ENST00000489868 SIMC1Q8NDZ2 872 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 OR6B3Q8NGW1 331 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 FAM136AQ96C01 138 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 DKK3Q9UBP4 350 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 SSX2IPQ9Y2D8 614 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 TMX2Q9Y320 296 aa6.5□□□□□ -1.37
CCDC39-206ENST00000489868 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.5□□□□□ -1.37
CCDC39-206ENST00000489868 hCG_1984214I3L0E3 225 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 PPM1DO15297 605 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 FRS3O43559 492 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 THP07101 528 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 ATXN1LP0C7T5 689 aaKnown RBP6.49□□□□□ -1.37
CCDC39-206ENST00000489868 CXCR5P32302 372 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 SUMO3P55854 103 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-206ENST00000489868 LOXL3P58215 753 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 ITIH3Q06033 890 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 SLC13A2Q13183 592 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 PTPRRQ15256 657 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 KIAA0753Q2KHM9 967 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 AMOTQ4VCS5 1084 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 SRGAP1Q7Z6B7 1085 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 DGKHQ86XP1 1220 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 LRTOMTQ8WZ04 291 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 PGBD1Q96JS3 809 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 MESP1Q9BRJ9 268 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 PRDM11Q9NQV5 511 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 LRIT1Q9P2V4 623 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 TBC1D30Q9Y2I9 924 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 MRPS17Q9Y2R5 130 aaKnown RBP6.49□□□□□ -1.37
CCDC39-206ENST00000489868 PCDHGB6Q9Y5F9 930 aa6.49□□□□□ -1.37
CCDC39-206ENST00000489868 BMP5P22003 454 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 PCSK6P29122 969 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 PXNP49023 591 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-206ENST00000489868 RARRES1P49788 294 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 PURAQ00577 322 aaKnown RBP6.48□□□□□ -1.37
CCDC39-206ENST00000489868 KAZNQ674X7 775 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 LMBRD2Q68DH5 695 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-206ENST00000489868 MICU3Q86XE3 530 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 OR56A3Q8NH54 315 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 RFKQ969G6 155 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 C11orf21Q9P2W6 132 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 SERTAD3Q9UJW9 196 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 TPCN1Q9ULQ1 816 aa6.48□□□□□ -1.37
CCDC39-206ENST00000489868 MYF5P13349 255 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 PEX2P28328 305 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 CACNB3P54284 484 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 NXPH1P58417 271 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 FMO1Q01740 532 aa6.47□□□□□ -1.37
CCDC39-206ENST00000489868 EIF2B5Q13144 721 aaKnown RBP6.47□□□□□ -1.37
CCDC39-206ENST00000489868 SEMA5AQ13591 1074 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms