RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 INMTO95050 263 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 HRGP04196 525 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 TNFSF4P23510 183 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 PEX2P28328 305 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 BMPR1AP36894 532 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 SREBF1P36956 1147 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 GRK6P43250 576 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 STT3AP46977 705 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 EIF5P55010 431 aaKnown RBP3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 RAP2BP61225 183 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 SRSF2Q01130 221 aaKnown RBP3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 GUCY1B3Q02153 619 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 NUCB1Q02818 461 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 GALNT1Q10472 559 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 TP53BP2Q13625 1128 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 MUM1Q2TAK8 710 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 SPECC1Q5M775 1068 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 OLFML1Q6UWY5 402 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 ZNF572Q7Z3I7 529 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 MYLK4Q86YV6 388 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 LCORLQ8N3X6 602 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 OR7D4Q8NG98 312 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 GCC1Q96CN9 775 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 MYLK2Q9H1R3 596 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 SYNPO2LQ9H987 977 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 IFT122Q9HBG6 1241 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 IFT80Q9P2H3 777 aaPredicted RBP3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 GRHPRQ9UBQ7 328 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 SCOCQ9UIL1 159 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 NOL7Q9UMY1 257 aaKnown RBP3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 L1RE1Q9UN81 338 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 CRYL1Q9Y2S2 319 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 WDR62O43379 1518 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 CEP164Q9UPV0 1460 aa3.74□□□□□ -1.81
DEPDC1-204ENST00000489862 RRN3P2A6NIE6 340 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 PJA2O43164 708 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 SPDEFO95238 335 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 SPATA31D3P0C874 917 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 VDRP11473 427 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ATP1A3P13637 1013 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ALOX15P16050 662 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 DDX6P26196 483 aaKnown RBP eCLIP3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 TUBP50607 506 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 PER3P56645 1201 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 TAP1Q03518 808 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 PPP3CAQ08209 521 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 RESTQ13127 1097 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 SLC45A4Q5BKX6 768 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 AFMIDQ63HM1 303 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 GGT6Q6P531 493 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 NPNTQ6UXI9 565 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 SPATA31D4Q6ZUB0 917 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 MED25Q71SY5 747 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 KRT77Q7Z794 578 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 KIAA0319LQ8IZA0 1049 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 PQLC1Q8N2U9 271 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 SUPT20HQ8NEM7 779 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ASB10Q8WXI3 467 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 FATE1Q969F0 183 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 UBXN10Q96LJ8 280 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 TBATAQ96M53 351 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ORAI2Q96SN7 254 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 UHRF1Q96T88 793 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 BARD1Q99728 777 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ISCA1Q9BUE6 129 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ACE2Q9BYF1 805 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 LDAHQ9H6V9 325 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 BCO1Q9HAY6 547 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 AGO4Q9HCK5 861 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 SYBUQ9NX95 663 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 CORO2BQ9UQ03 480 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 PCDHGB2Q9Y5G2 931 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 MRFAP1Q9Y605 127 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 EPN1Q9Y6I3 576 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 FPGT-TNNI3KV9GXZ4 949 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 PIPSLA2A3N6 862 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ORC4O43929 436 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 UBXN7O94888 489 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ELANEP08246 267 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 SNRPA1P09661 255 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 RAP2AP10114 183 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 CKMT1AP12532 417 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ECHS1P30084 290 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 PDIA3P30101 505 aaKnown RBP3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 CCT5P48643 541 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 CASP5P51878 434 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 FOXI1Q12951 378 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 NOMO1Q15155 1222 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 TAF5Q15542 800 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 ANO4Q32M45 955 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 MUM1L1Q5H9M0 696 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 TSHZ3Q63HK5 1081 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 MZT2BQ6NZ67 158 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 CYP26C1Q6V0L0 522 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 SRGAP1Q7Z6B7 1085 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 HEATR4Q86WZ0 1026 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 PPM1NQ8N819 430 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 NAXEQ8NCW5 288 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 OR56A1Q8NGH5 318 aa3.73□□□□□ -1.81
DEPDC1-204ENST00000489862 PPM1MQ96MI6 270 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms