RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 MCOLN2Q8IZK6 566 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 B3GALNT2Q8NCR0 500 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 RFFLQ8WZ73 363 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 ZNF653Q96CK0 615 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 TRIM11Q96F44 468 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 FAM49BQ9NUQ9 324 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 TSPAN16Q9UKR8 245 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 TSC2P49815 1807 aa22.15■■□□□ 1.14
SND1-214ENST00000489417 TRAPPC3O43617 180 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 GALTP07902 379 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 PTPN1P18031 435 aaKnown RBP22.14■■□□□ 1.14
SND1-214ENST00000489417 ACAT1P24752 427 aaKnown RBP22.14■■□□□ 1.14
SND1-214ENST00000489417 NAP1L1P55209 391 aaKnown RBP22.14■■□□□ 1.14
SND1-214ENST00000489417 PSMC1P62191 440 aaKnown RBP22.14■■□□□ 1.14
SND1-214ENST00000489417 FAM117BQ6P1L5 589 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 MON1BQ7L1V2 547 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 WDTC1Q8N5D0 677 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 ZNF689Q96CS4 500 aaPredicted RBP22.14■■□□□ 1.14
SND1-214ENST00000489417 NOX5Q96PH1 765 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 LPIN3Q9BQK8 851 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 SYT15Q9BQS2 421 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 RC3H2Q9HBD1 1191 aaKnown RBP22.14■■□□□ 1.14
SND1-214ENST00000489417 MARCH5Q9NX47 278 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 DNAI1Q9UI46 699 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 GTF3C4Q9UKN8 822 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 ADAM28Q9UKQ2 775 aa22.14■■□□□ 1.14
SND1-214ENST00000489417 ZBBXA8MT70 800 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 BUB1O43683 1085 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 MYBL1P10243 752 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 SYN1P17600 705 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 PCSK1P29120 753 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 C1QBPQ07021 282 aaKnown RBP22.14■■□□□ 1.13
SND1-214ENST00000489417 IFI16Q16666 785 aaKnown RBP22.14■■□□□ 1.13
SND1-214ENST00000489417 PSRC1Q6PGN9 363 aaPredicted RBP22.14■■□□□ 1.13
SND1-214ENST00000489417 TMCO2Q7Z6W1 182 aaPredicted RBP22.14■■□□□ 1.13
SND1-214ENST00000489417 SLC35F6Q8N357 371 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 ABHD8Q96I13 439 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 VCPIP1Q96JH7 1222 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 WDR24Q96S15 920 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 C11orf70Q9BRQ4 267 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 CWH43Q9H720 699 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 ADAM22Q9P0K1 906 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 HESX1Q9UBX0 185 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 CDH9Q9ULB4 789 aa22.14■■□□□ 1.13
SND1-214ENST00000489417 ATP2C2O75185 946 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 CYP1A2P05177 515 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 NOP2P46087 812 aaKnown RBP22.13■■□□□ 1.13
SND1-214ENST00000489417 EPHB4P54760 987 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 BCAR1P56945 870 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 TCEAL1Q15170 157 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 TMEM240Q5SV17 173 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 KIAA0319Q5VV43 1072 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 OVOS1Q6IE37 1185 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 MMS22LQ6ZRQ5 1243 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 RHOT2Q8IXI1 618 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 CMTR2Q8IYT2 770 aaKnown RBP22.13■■□□□ 1.13
SND1-214ENST00000489417 UBA3Q8TBC4 463 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 ZNF592Q92610 1267 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 RTP3Q9BQQ7 232 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 CNOT8Q9UFF9 292 aaKnown RBP22.13■■□□□ 1.13
SND1-214ENST00000489417 CAPN6Q9Y6Q1 641 aa22.13■■□□□ 1.13
SND1-214ENST00000489417 ATMINO43313 823 aaPredicted RBP22.12■■□□□ 1.13
SND1-214ENST00000489417 CCDC130P13994 396 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 MMP8P22894 467 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 GPD2P43304 727 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 PTP4A2Q12974 167 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 LIN9Q5TKA1 542 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 ERICH1Q86X53 443 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 THEM5Q8N1Q8 247 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 TRIM58Q8NG06 486 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 SLC35G2Q8TBE7 412 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 ALS2CR12Q96Q35 445 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 ACBD6Q9BR61 282 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 CRTAC1Q9NQ79 661 aa22.12■■□□□ 1.13
SND1-214ENST00000489417 AVENQ9NQS1 362 aaPredicted RBP22.12■■□□□ 1.13
SND1-214ENST00000489417 ZMYND8Q9ULU4 1186 aaPredicted RBP22.12■■□□□ 1.13
SND1-214ENST00000489417 SF3B1O75533 1304 aaKnown RBP eCLIP22.11■■□□□ 1.131e-6■■■■■ 76.1
SND1-214ENST00000489417 SYN3O14994 580 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 CALB1P05937 261 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 SETSIPP0DME0 302 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 ADORA2BP29275 332 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 TKTP29401 623 aaKnown RBP22.11■■□□□ 1.13
SND1-214ENST00000489417 PBX3P40426 434 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 YWHAHQ04917 246 aaPredicted RBP22.11■■□□□ 1.13
SND1-214ENST00000489417 ELAVL2Q12926 359 aaKnown RBP22.11■■□□□ 1.13
SND1-214ENST00000489417 PKDCCQ504Y2 493 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 MDH1BQ5I0G3 518 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 TTC30AQ86WT1 665 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 MSANTD4Q8NCY6 345 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 SLC2A14Q8TDB8 520 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 HNRNPABQ99729 332 aaKnown RBP22.11■■□□□ 1.13
SND1-214ENST00000489417 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.11■■□□□ 1.135e-8■■■■□ 21.4
SND1-214ENST00000489417 CTTNBP2NLQ9P2B4 639 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 CYTH4Q9UIA0 394 aa22.11■■□□□ 1.13
SND1-214ENST00000489417 NT5C1B-RDH14C9J2C7 533 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 RRM1P23921 792 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 CASQ1P31415 396 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 ALDH7A1P49419 539 aaKnown RBP22.1■■□□□ 1.13
SND1-214ENST00000489417 BCAT1P54687 386 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 BTG3Q14201 252 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms