RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SMAD1Q15797 465 aaKnown RBP16.42■□□□□ 0.22
UFD1-209ENST00000489406 TAF12Q16514 161 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 TRIML1Q8N9V2 468 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 IL17RCQ8NAC3 791 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 OSCP1Q8WVF1 389 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 BAP1Q92560 729 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 ATP2A3Q93084 1043 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 C18orf25Q96B23 403 aaPredicted RBP16.42■□□□□ 0.22
UFD1-209ENST00000489406 NXPE2Q96DL1 559 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 HSPA12BQ96MM6 686 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 CDC6Q99741 560 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 IL21RQ9HBE5 538 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 ZDHHC4Q9NPG8 344 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 ZMYM5Q9UJ78 669 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 ZNF638Q14966 1978 aaKnown RBP16.41■□□□□ 0.22
UFD1-209ENST00000489406 SLC27A2O14975 620 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 PRPF3O43395 683 aaKnown RBP16.41■□□□□ 0.22
UFD1-209ENST00000489406 SLITRK3O94933 977 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 OPRD1P41143 372 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 IL12RB1P42701 662 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 YARSP54577 528 aaKnown RBP16.41■□□□□ 0.22
UFD1-209ENST00000489406 OSTNP61366 133 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 NR1H3Q13133 447 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 VEPH1Q14D04 833 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 EML3Q32P44 896 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 XKR4Q5GH76 650 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 TXNDC8Q6A555 127 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 ALKAL1Q6UXT8 129 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 SFTPA1Q8IWL2 248 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 CEP120Q8N960 986 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 GIPC2Q8TF65 315 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 WBP1Q96G27 269 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 CCDC43Q96MW1 224 aaKnown RBP16.41■□□□□ 0.22
UFD1-209ENST00000489406 SEPT5Q99719 369 aaPredicted RBP16.41■□□□□ 0.22
UFD1-209ENST00000489406 NXF1Q9UBU9 619 aaKnown RBP16.41■□□□□ 0.22
UFD1-209ENST00000489406 AK5Q9Y6K8 562 aa16.41■□□□□ 0.22
UFD1-209ENST00000489406 SPTAN1Q13813 2472 aaKnown RBP16.41■□□□□ 0.22
UFD1-209ENST00000489406 TSC2P49815 1807 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 A0A087WWV3 80 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 USO1O60763 962 aaKnown RBP16.4■□□□□ 0.22
UFD1-209ENST00000489406 KRT10P13645 584 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 ATF6P18850 670 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 NLRP5P59047 1200 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 SCRN1Q12765 414 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 EOGTQ5NDL2 527 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 EMC10Q5UCC4 262 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 MOXD1Q6UVY6 613 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 DHRS13Q6UX07 377 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 TMEM150AQ86TG1 271 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 SMC5Q8IY18 1101 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 FAM20AQ96MK3 541 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 C22orf23Q9BZE7 217 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 ZDHHC5Q9C0B5 715 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 C2orf40Q9H1Z8 148 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 FAM124BQ9H5Z6 455 aaPredicted RBP16.4■□□□□ 0.22
UFD1-209ENST00000489406 KCNMB3Q9NPA1 279 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 TOPORSQ9NS56 1045 aaPredicted RBP16.4■□□□□ 0.22
UFD1-209ENST00000489406 TM7SF3Q9NS93 570 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 IL17BQ9UHF5 180 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 DOPEY2Q9Y3R5 2298 aa16.4■□□□□ 0.22
UFD1-209ENST00000489406 ANKRD17O75179 2603 aaKnown RBP16.4■□□□□ 0.22
UFD1-209ENST00000489406 UBR5O95071 2799 aaPredicted RBP16.39■□□□□ 0.21
UFD1-209ENST00000489406 OR6C75A6NL08 312 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 LARGE1O95461 756 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 GNSP15586 552 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 MAOBP27338 520 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 NUCB1Q02818 461 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 TLE3Q04726 772 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 PREPLQ4J6C6 727 aaPredicted RBP16.39■□□□□ 0.21
UFD1-209ENST00000489406 USP37Q86T82 979 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 EFCAB13Q8IY85 973 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 SPIRE2Q8WWL2 714 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 CCDC94Q9BW85 323 aaPredicted RBP16.39■□□□□ 0.21
UFD1-209ENST00000489406 OXCT2Q9BYC2 517 aaPredicted RBP16.39■□□□□ 0.21
UFD1-209ENST00000489406 CCDC113Q9H0I3 377 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 LINC00597Q9H2U6 94 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 GAREM1Q9H706 876 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 ANKEF1Q9NU02 776 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 SUSD2Q9UGT4 822 aa16.39■□□□□ 0.21
UFD1-209ENST00000489406 IGHV1OR15-9A0A0B4J2B8 117 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 ADAM23O75077 832 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 F11P03951 625 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 GSPT1P15170 499 aaKnown RBP16.38■□□□□ 0.21
UFD1-209ENST00000489406 DDX6P26196 483 aaKnown RBP eCLIP16.38■□□□□ 0.21
UFD1-209ENST00000489406 RARRES1P49788 294 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 NLRP12P59046 1061 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 AKAP17AQ02040 695 aaKnown RBP16.38■□□□□ 0.21
UFD1-209ENST00000489406 RHDQ02161 417 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 CCDC173Q0VFZ6 552 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 MYO1EQ12965 1108 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 ZNF268Q14587 947 aaPredicted RBP16.38■□□□□ 0.21
UFD1-209ENST00000489406 MGAT5BQ3V5L5 792 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 NT5DC1Q5TFE4 455 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 ATF7IP2Q5U623 682 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 PRICKLE2Q7Z3G6 844 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 MON1AQ86VX9 555 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 TMEM130Q8N3G9 435 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 PIGOQ8TEQ8 1089 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 BSNDQ8WZ55 320 aa16.38■□□□□ 0.21
UFD1-209ENST00000489406 TRIM4Q9C037 500 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms