RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RNF26Q9BY78 433 aaPredicted RBP10.04□□□□□ -0.8
SSBP1-212ENST00000489378 SH3GLB2Q9NR46 395 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 ANKEF1Q9NU02 776 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 TBX20Q9UMR3 447 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 RAI2Q9Y5P3 530 aa10.04□□□□□ -0.8
SSBP1-212ENST00000489378 ZNF638Q14966 1978 aaKnown RBP10.03□□□□□ -0.8
SSBP1-212ENST00000489378 NID2Q14112 1375 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 ACKR2O00590 384 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 OPHN1O60890 802 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 DXOO77932 396 aaKnown RBP10.03□□□□□ -0.8
SSBP1-212ENST00000489378 LYPLA2O95372 231 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 CPA1P15085 419 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 GJA4P35212 333 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 ALDH1A3P47895 512 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 TRIP6Q15654 476 aaKnown RBP10.03□□□□□ -0.8
SSBP1-212ENST00000489378 DCAF4L1Q3SXM0 396 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 XKR4Q5GH76 650 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 NT5DC1Q5TFE4 455 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 ALKAL1Q6UXT8 129 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 LPCAT2Q7L5N7 544 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 ZNF605Q86T29 641 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 TTC30AQ86WT1 665 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 TMEM130Q8N3G9 435 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 ATAD1Q8NBU5 361 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 OLIG1Q8TAK6 271 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 PIGOQ8TEQ8 1089 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 PSMG2Q969U7 264 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 C18orf25Q96B23 403 aaPredicted RBP10.03□□□□□ -0.8
SSBP1-212ENST00000489378 CNOT6LQ96LI5 555 aaKnown RBP10.03□□□□□ -0.8
SSBP1-212ENST00000489378 TBC1D32Q96NH3 1257 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 HSD17B14Q9BPX1 270 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 EIF2AK1Q9BQI3 630 aaKnown RBP10.03□□□□□ -0.8
SSBP1-212ENST00000489378 TIMM13Q9Y5L4 95 aaPredicted RBP10.03□□□□□ -0.8
SSBP1-212ENST00000489378 PTPRQQ9UMZ3 2332 aa10.03□□□□□ -0.8
SSBP1-212ENST00000489378 WNT7AO00755 349 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 SH3BP5O60239 455 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 HNRNPLP14866 589 aaKnown RBP eCLIP10.02□□□□□ -0.81
SSBP1-212ENST00000489378 ITPKAP23677 461 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 MCM4P33991 863 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 P2RY2P41231 377 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 ATXN3P54252 364 aaPredicted RBP10.02□□□□□ -0.81
SSBP1-212ENST00000489378 OSTNP61366 133 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 AMPD2Q01433 879 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 CENPPQ6IPU0 288 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 MARCH9Q86YJ5 346 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 ZNF843Q8N446 348 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 MINDY1Q8N5J2 469 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 APPL2Q8NEU8 664 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 USP13Q92995 863 aaPredicted RBP10.02□□□□□ -0.81
SSBP1-212ENST00000489378 CCDC43Q96MW1 224 aaKnown RBP10.02□□□□□ -0.81
SSBP1-212ENST00000489378 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 ESYT1Q9BSJ8 1104 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 KIFC3Q9BVG8 833 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 ANO2Q9NQ90 1003 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 SLC38A7Q9NVC3 462 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 PILRBQ9UKJ0 227 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 ASB3Q9Y575 518 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 DENND4CQ5VZ89 1909 aa10.02□□□□□ -0.81
SSBP1-212ENST00000489378 A0A087WV48 116 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 ATXN7O15265 892 aaPredicted RBP10.01□□□□□ -0.81
SSBP1-212ENST00000489378 MARCH6O60337 910 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 OAZ2O95190 189 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 FGF19O95750 216 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 IFNAR1P17181 557 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 RPL9P32969 192 aaKnown RBP10.01□□□□□ -0.81
SSBP1-212ENST00000489378 CDR1P51861 262 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 SEC13P55735 322 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 GFPT1Q06210 699 aaPredicted RBP10.01□□□□□ -0.81
SSBP1-212ENST00000489378 HNRNPDQ14103 355 aaKnown RBP10.01□□□□□ -0.81
SSBP1-212ENST00000489378 C2orf27AQ580R0 203 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 ATF7IP2Q5U623 682 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 PEAR1Q5VY43 1037 aaPredicted RBP10.01□□□□□ -0.81
SSBP1-212ENST00000489378 LYSMD4Q5XG99 296 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 SLCO6A1Q86UG4 719 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 CMTM8Q8IZV2 173 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 CCDC33Q8N5R6 958 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 USP33Q8TEY7 942 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 BRF1Q92994 677 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 CD101Q93033 1021 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 USB1Q9BQ65 265 aaKnown RBP10.01□□□□□ -0.81
SSBP1-212ENST00000489378 C2orf40Q9H1Z8 148 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 CAPN10Q9HC96 672 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 NCOA5Q9HCD5 579 aaKnown RBP10.01□□□□□ -0.81
SSBP1-212ENST00000489378 DKK4Q9UBT3 224 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 SLC6A14Q9UN76 642 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 CITO14578 2027 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 CEP192Q8TEP8 1941 aa10.01□□□□□ -0.81
SSBP1-212ENST00000489378 HELZP42694 1942 aaKnown RBP10□□□□□ -0.81
SSBP1-212ENST00000489378 PLXND1Q9Y4D7 1925 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 MTMR11A4FU01 709 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 ZBTB24O43167 697 aaPredicted RBP10□□□□□ -0.81
SSBP1-212ENST00000489378 CCNT1O60563 726 aaKnown RBP10□□□□□ -0.81
SSBP1-212ENST00000489378 KCNE1P15382 129 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 MARCKSP29966 332 aaPredicted RBP10□□□□□ -0.81
SSBP1-212ENST00000489378 GRM5P41594 1212 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 YARSP54577 528 aaKnown RBP10□□□□□ -0.81
SSBP1-212ENST00000489378 YWHAHQ04917 246 aaPredicted RBP10□□□□□ -0.81
SSBP1-212ENST00000489378 CYP4F3Q08477 520 aa10□□□□□ -0.81
SSBP1-212ENST00000489378 GPR17Q13304 367 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms