RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CFAP97Q9P2B7 532 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 MYO1AQ9UBC5 1043 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 ZDHHC8Q9ULC8 765 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 GTF2A1LQ9UNN4 478 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 ATP11BQ9Y2G3 1177 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 MED16Q9Y2X0 877 aa5.16□□□□□ -1.58
XRN1-213ENST00000489241 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.16□□□□□ -1.58
XRN1-213ENST00000489241 BTN3A1O00481 513 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 TRIM24O15164 1050 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 PPFIA2O75334 1257 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 ABHD16AO95870 558 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 THP07101 528 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 CD53P19397 219 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 FGFR2P21802 821 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 PHKA1P46020 1223 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 CHN2P52757 468 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 NHLH2Q02577 135 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 BLMHQ13867 455 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 CSRP2Q16527 193 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 CCDC93Q567U6 631 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 PRR16Q569H4 304 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 UTP14CQ5TAP6 766 aaKnown RBP5.15□□□□□ -1.59
XRN1-213ENST00000489241 PGBD2Q6P3X8 592 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 ZNF575Q86XF7 245 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 ZNF527Q8NB42 609 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 OR6B3Q8NGW1 331 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 TBC1D15Q8TC07 691 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 NUP133Q8WUM0 1156 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 ISCA1Q9BUE6 129 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 MYLK2Q9H1R3 596 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 SLAMF7Q9NQ25 335 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 SORCS3Q9UPU3 1222 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 LZTS1Q9Y250 596 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 GPR52Q9Y2T5 361 aa5.15□□□□□ -1.59
XRN1-213ENST00000489241 CDHR4A6H8M9 788 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 FFAR2O15552 330 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 CSTBP04080 98 aaKnown RBP5.14□□□□□ -1.59
XRN1-213ENST00000489241 ITGB1P05556 798 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 GCSHP23434 173 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 EEF1GP26641 437 aaKnown RBP5.14□□□□□ -1.59
XRN1-213ENST00000489241 PDIA3P30101 505 aaKnown RBP5.14□□□□□ -1.59
XRN1-213ENST00000489241 APOBEC3AP31941 199 aaPredicted RBP5.14□□□□□ -1.59
XRN1-213ENST00000489241 KCNJ5P48544 419 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 CCT5P48643 541 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 GALNT1Q10472 559 aaPredicted RBP5.14□□□□□ -1.59
XRN1-213ENST00000489241 KIF22Q14807 665 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 ALFQ53S48 1182 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 TSHZ3Q63HK5 1081 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 LAIR1Q6GTX8 287 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 GGT6Q6P531 493 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 ZNF783Q6ZMS7 281 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 LRRC55Q6ZSA7 311 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 ZNF365Q70YC5 407 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 MICU3Q86XE3 530 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 PDSS2Q86YH6 399 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 TXLNBQ8N3L3 684 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 ZNF566Q969W8 418 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 STK33Q9BYT3 514 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.14□□□□□ -1.59
XRN1-213ENST00000489241 C9orf78Q9NZ63 289 aaPredicted RBP5.14□□□□□ -1.59
XRN1-213ENST00000489241 ANAPC4Q9UJX5 808 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 MAGED2Q9UNF1 606 aaPredicted RBP5.14□□□□□ -1.59
XRN1-213ENST00000489241 FZD1Q9UP38 647 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 CEP83Q9Y592 693 aa5.14□□□□□ -1.59
XRN1-213ENST00000489241 LEFTY2O00292 366 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 TBC1D4O60343 1298 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 AGFG2O95081 481 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 SCAF4O95104 1147 aaKnown RBP5.13□□□□□ -1.59
XRN1-213ENST00000489241 MT-ND5P03915 603 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 GNAI2P04899 355 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 SLC6A4P31645 630 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 ALDH9A1P49189 494 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 RNASE9P60153 205 aaKnown RBP5.13□□□□□ -1.59
XRN1-213ENST00000489241 NOMO3P69849 1222 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 COL10A1Q03692 680 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 FSTL1Q12841 308 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 SLC13A2Q13183 592 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 HABP2Q14520 560 aaPredicted RBP5.13□□□□□ -1.59
XRN1-213ENST00000489241 FOXR2Q6PJQ5 311 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 GDF7Q7Z4P5 450 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 SYT12Q8IV01 421 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 RHOT2Q8IXI1 618 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 CACNA2D3Q8IZS8 1091 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 PAF1Q8N7H5 531 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 CPT1CQ8TCG5 803 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 DDX17Q92841 729 aaKnown RBP5.13□□□□□ -1.59
XRN1-213ENST00000489241 TBC1D20Q96BZ9 403 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 C18orf8Q96DM3 657 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 IQCDQ96DY2 449 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 SNX22Q96L94 193 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 CRAMP1Q96RY5 1269 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 PNKPQ96T60 521 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 SIK2Q9H0K1 926 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 SERHLQ9NQF3 203 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 TRPM5Q9NZQ8 1165 aa5.13□□□□□ -1.59
XRN1-213ENST00000489241 USP15Q9Y4E8 981 aaPredicted RBP5.13□□□□□ -1.59
XRN1-213ENST00000489241 ANXA2P07355 339 aaKnown RBP5.12□□□□□ -1.59
XRN1-213ENST00000489241 GJB1P08034 283 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 IL1R1P14778 569 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 NR4A1P22736 598 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms