RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 PDCL3Q9H2J4 239 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 PRDM5Q9NQX1 630 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-206ENST00000489131 PUF60Q9UHX1 559 aaKnown RBP13.61□□□□□ -0.23
TOP3A-206ENST00000489131 DNAI1Q9UI46 699 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 CDH9Q9ULB4 789 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 JRKLQ9Y4A0 524 aa13.61□□□□□ -0.23
TOP3A-206ENST00000489131 GRID2IPA4D2P6 1211 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 TMCO5BA8MYB1 307 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 TRAPPC3O43617 180 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 OAZ2O95190 189 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 ITGB1P05556 798 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 PLCB3Q01970 1234 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 ELAVL2Q12926 359 aaKnown RBP13.6□□□□□ -0.23
TOP3A-206ENST00000489131 TUBB2AQ13885 445 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 PPP1R26Q5T8A7 1209 aaPredicted RBP13.6□□□□□ -0.23
TOP3A-206ENST00000489131 PAPD7Q5XG87 772 aaKnown RBP13.6□□□□□ -0.23
TOP3A-206ENST00000489131 C11orf63Q6NUN7 778 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 DENND1BQ6P3S1 775 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 CMTR2Q8IYT2 770 aaKnown RBP13.6□□□□□ -0.23
TOP3A-206ENST00000489131 SLC35F6Q8N357 371 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 ANKRD52Q8NB46 1076 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 C1orf131Q8NDD1 294 aaKnown RBP13.6□□□□□ -0.23
TOP3A-206ENST00000489131 SLC35F5Q8WV83 523 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 CPA5Q8WXQ8 436 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 PKMYT1Q99640 499 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 RTP3Q9BQQ7 232 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 TUBB2BQ9BVA1 445 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 COLEC11Q9BWP8 271 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 DPEP3Q9H4B8 488 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 L2HGDHQ9H9P8 463 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 ABCB6Q9NP58 842 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 MARCH5Q9NX47 278 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 DDX43Q9NXZ2 648 aaKnown RBP13.6□□□□□ -0.23
TOP3A-206ENST00000489131 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 LCMT1Q9UIC8 334 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 TSPAN16Q9UKR8 245 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 STRIP2Q9ULQ0 834 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 COG5Q9UP83 839 aa13.6□□□□□ -0.23
TOP3A-206ENST00000489131 PTPRSQ13332 1948 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 NRP1O14786 923 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 MOCS3O95396 460 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 ALDH2P05091 517 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 GALTP07902 379 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 PRLRP16471 622 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 PTPN1P18031 435 aaKnown RBP13.59□□□□□ -0.23
TOP3A-206ENST00000489131 ABCB4P21439 1286 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 CASQ1P31415 396 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 GATMP50440 423 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 BCAT1P54687 386 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 AMPD2Q01433 879 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 PDCLQ13371 301 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 ORC1Q13415 861 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 MRPL58Q14197 206 aaKnown RBP13.59□□□□□ -0.23
TOP3A-206ENST00000489131 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 KIAA0319Q5VV43 1072 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 FAM171BQ6P995 826 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 C16orf59Q7L2K0 433 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 TTC30AQ86WT1 665 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 METTL23Q86XA0 190 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 DNAAF5Q86Y56 855 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 PASD1Q8IV76 773 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 RNF168Q8IYW5 571 aaPredicted RBP13.59□□□□□ -0.23
TOP3A-206ENST00000489131 SYCE1Q8N0S2 351 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 C12orf29Q8N999 325 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 MSANTD4Q8NCY6 345 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 ZNF653Q96CK0 615 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 NAPGQ99747 312 aaPredicted RBP13.59□□□□□ -0.23
TOP3A-206ENST00000489131 SLC4A5Q9BY07 1137 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 OXCT2Q9BYC2 517 aaPredicted RBP13.59□□□□□ -0.23
TOP3A-206ENST00000489131 MIS12Q9H081 205 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 CWH43Q9H720 699 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 MRPL47Q9HD33 250 aaKnown RBP13.59□□□□□ -0.23
TOP3A-206ENST00000489131 ADAM22Q9P0K1 906 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 WDR35Q9P2L0 1181 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 CNOT8Q9UFF9 292 aaKnown RBP13.59□□□□□ -0.23
TOP3A-206ENST00000489131 CYTH4Q9UIA0 394 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 ADAM28Q9UKQ2 775 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 SCINQ9Y6U3 715 aa13.59□□□□□ -0.23
TOP3A-206ENST00000489131 CTAGE9A4FU28 777 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 TBKBP1A7MCY6 615 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 M0QYV0 167 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 FGFR3P22607 806 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 RRM1P23921 792 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 SCNN1AP37088 669 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 BRCC3P46736 316 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 PLA2G4AP47712 749 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 SLC11A1P49279 550 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 TAP1Q03518 808 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 FPGSQ05932 587 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 MAPRE1Q15691 268 aaKnown RBP13.58□□□□□ -0.24
TOP3A-206ENST00000489131 GOLGA7BQ2TAP0 167 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 PTPN20Q4JDL3 420 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 DNTTIP2Q5QJE6 756 aaKnown RBP13.58□□□□□ -0.24
TOP3A-206ENST00000489131 LIN9Q5TKA1 542 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 PSRC1Q6PGN9 363 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-206ENST00000489131 MMS22LQ6ZRQ5 1243 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 TMEM110Q86TL2 294 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 ERICH1Q86X53 443 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 FUKQ8N0W3 1084 aa13.58□□□□□ -0.24
TOP3A-206ENST00000489131 C3orf20Q8ND61 904 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms