RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NUMBLQ9Y6R0 609 aa15.28■□□□□ 0.04
BRCA1-218ENST00000489037 SOAT2O75908 522 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 CEBPBP17676 345 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 CCNE1P24864 410 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 CDR1P51861 262 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 EPHA5P54756 1037 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 ARHGAP15Q53QZ3 475 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 ANKRD40Q6AI12 368 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 LIMS2Q7Z4I7 341 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 GIPC2Q8TF65 315 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 KBTBD7Q8WVZ9 684 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 TCEAL4Q96EI5 215 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 FUBP3Q96I24 572 aaKnown RBP eCLIP15.27■□□□□ 0.04
BRCA1-218ENST00000489037 DNAI2Q9GZS0 605 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 MFSD1Q9H3U5 465 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 SLITRK6Q9H5Y7 841 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 MMRN2Q9H8L6 949 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 TMLHEQ9NVH6 421 aa15.27■□□□□ 0.04
BRCA1-218ENST00000489037 BICDL2A1A5D9 508 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 A8MXQ7 604 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 TRIM49P0CI25 452 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 TRIM49CP0CI26 452 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 CSH1P0DML2 217 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 CSH2P0DML3 217 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 SRFP11831 508 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 COL9A1P20849 921 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 LMO2P25791 158 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 CDC25CP30307 473 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 GTF2H1P32780 548 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 GCLMP48507 274 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 CYP27A1Q02318 531 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 TCERG1LQ5VWI1 586 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 FAM171BQ6P995 826 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 PARM1Q6UWI2 310 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 HFE2Q6ZVN8 426 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 FGF14Q92915 247 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 LPIN3Q9BQK8 851 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 MRPL45Q9BRJ2 306 aaKnown RBP15.26■□□□□ 0.03
BRCA1-218ENST00000489037 XYLT2Q9H1B5 865 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 DNAJC25Q9H1X3 360 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 ATXN3LQ9H3M9 355 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 ZFP14Q9HCL3 533 aa15.26■□□□□ 0.03
BRCA1-218ENST00000489037 A0A1W2PRU2 124 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 MYBPHLA2RUH7 354 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 BIN1O00499 593 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 SLC16A3O15427 465 aaKnown RBP15.25■□□□□ 0.03
BRCA1-218ENST00000489037 VNN1O95497 513 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 HLA-DRAP01903 254 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 ATF6P18850 670 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 RFX1P22670 979 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 CYP2F1P24903 491 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 ANXA13P27216 316 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 GABRR2P28476 465 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 CCR2P41597 374 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 PSMC1P62191 440 aaKnown RBP15.25■□□□□ 0.03
BRCA1-218ENST00000489037 TEAD2Q15562 447 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 CFAP221Q4G0U5 840 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 KRT39Q6A163 491 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 KLHL10Q6JEL2 608 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 SCN4BQ8IWT1 228 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 FBXL6Q8N531 539 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 TRIML1Q8N9V2 468 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 SHKBP1Q8TBC3 707 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 ASIC4Q96FT7 647 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 EEF2KMTQ96G04 330 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 TNIP3Q96KP6 325 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 GBP4Q96PP9 640 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 SMOC2Q9H3U7 446 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 TMEM8AQ9HCN3 771 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 UXTQ9UBK9 157 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-218ENST00000489037 WNT16Q9UBV4 365 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 DENND4CQ5VZ89 1909 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 ZDBF2Q9HCK1 2354 aa15.25■□□□□ 0.03
BRCA1-218ENST00000489037 ATP8B3O60423 1300 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 PTPRDP23468 1912 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 STK25O00506 426 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 HCRTO43612 131 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 NARSO43776 548 aaKnown RBP15.24■□□□□ 0.03
BRCA1-218ENST00000489037 ATP2C2O75185 946 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 ECI2O75521 394 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 CFHP08603 1231 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 GJA1P17302 382 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 PTPN1P18031 435 aaKnown RBP15.24■□□□□ 0.03
BRCA1-218ENST00000489037 MAGEA11P43364 429 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 MORC3Q14149 939 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 CAMK4Q16566 473 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 DDR2Q16832 855 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 DCAF17Q5H9S7 520 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-218ENST00000489037 MDH1BQ5I0G3 518 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 C1orf220Q5T0J3 134 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 VSTM1Q6UX27 236 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 SCARA5Q6ZMJ2 495 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 TMC8Q8IU68 726 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 ST13P5Q8NFI4 369 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-218ENST00000489037 MYCBPAPQ8TBZ2 947 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 SMARCD2Q92925 531 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 MYLPFQ96A32 169 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 E2F7Q96AV8 911 aa15.24■□□□□ 0.03
BRCA1-218ENST00000489037 ELSPBP1Q96BH3 223 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms