RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 TTPALQ9BTX7 342 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 PLVAPQ9BX97 442 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 LHX5Q9H2C1 402 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 CRTAC1Q9NQ79 661 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 PUF60Q9UHX1 559 aaKnown RBP17.02■□□□□ 0.32
CLDN11-208ENST00000488989 NAGPAQ9UK23 515 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 PYCARDQ9ULZ3 195 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.02■□□□□ 0.32
CLDN11-208ENST00000488989 ZKSCAN5Q9Y2L8 839 aa17.02■□□□□ 0.32
CLDN11-208ENST00000488989 TNRC18O15417 2968 aaPredicted RBP17.02■□□□□ 0.31
CLDN11-208ENST00000488989 OR6C75A6NL08 312 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 GRXCR1A8MXD5 290 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 C5orf67F2Z3F1 127 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 H7C4K7 107 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 UNGP13051 313 aaPredicted RBP17.01■□□□□ 0.31
CLDN11-208ENST00000488989 ACAT1P24752 427 aaKnown RBP17.01■□□□□ 0.31
CLDN11-208ENST00000488989 BMPR1AP36894 532 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 GFPT1Q06210 699 aaPredicted RBP17.01■□□□□ 0.31
CLDN11-208ENST00000488989 PKDCCQ504Y2 493 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 RTP2Q5QGT7 225 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 PPP1R26Q5T8A7 1209 aaPredicted RBP17.01■□□□□ 0.31
CLDN11-208ENST00000488989 ZNF280DQ6N043 979 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 ANKS3Q6ZW76 656 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 PALB2Q86YC2 1186 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 C12orf29Q8N999 325 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 PIK3R5Q8WYR1 880 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 HNRNPABQ99729 332 aaKnown RBP17.01■□□□□ 0.31
CLDN11-208ENST00000488989 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLDN11-208ENST00000488989 SPTLC3Q9NUV7 552 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.01■□□□□ 0.31
CLDN11-208ENST00000488989 REXO2Q9Y3B8 237 aaKnown RBP17.01■□□□□ 0.31
CLDN11-208ENST00000488989 ADGRG1Q9Y653 693 aa17.01■□□□□ 0.31
CLDN11-208ENST00000488989 HSFX4A0A1B0GTS1 333 aaPredicted RBP17■□□□□ 0.31
CLDN11-208ENST00000488989 HSFX3A0A1B0GWH4 333 aaPredicted RBP17■□□□□ 0.31
CLDN11-208ENST00000488989 ATP2C2O75185 946 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 CAPN15O75808 1086 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 FGF18O76093 207 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 LSM8O95777 96 aaKnown RBP17■□□□□ 0.31
CLDN11-208ENST00000488989 RB1P06400 928 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 CFHP08603 1231 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 PSMC1P62191 440 aaKnown RBP17■□□□□ 0.31
CLDN11-208ENST00000488989 NOMO3P69849 1222 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 DSG1Q02413 1049 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 CLEC16AQ2KHT3 1053 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 C10orf76Q5T2E6 689 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 ALKBH5Q6P6C2 394 aaKnown RBP17■□□□□ 0.31
CLDN11-208ENST00000488989 TOGARAM2Q6ZUX3 1019 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 MYCBPAPQ8TBZ2 947 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 CYFIP2Q96F07 1278 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 SAMD11Q96NU1 681 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 ZNF518BQ9C0D4 1074 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 ZCWPW1Q9H0M4 648 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 ISCUQ9H1K1 167 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 PRO3102Q9H379 93 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 KCND1Q9NSA2 647 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 MTRRQ9UBK8 725 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 TSPAN16Q9UKR8 245 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 LZTS1Q9Y250 596 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 BACE2Q9Y5Z0 518 aa17■□□□□ 0.31
CLDN11-208ENST00000488989 PATJQ8NI35 1801 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 MYBPHLA2RUH7 354 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 MICAL2O94851 1124 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 ARHGEF15O94989 841 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 KRT83P78385 493 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 TSPY1Q01534 308 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 CENPCQ03188 943 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 KRT17Q04695 432 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 MAPRE1Q15691 268 aaKnown RBP16.99■□□□□ 0.31
CLDN11-208ENST00000488989 PPP1R2P3Q6NXS1 205 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 PAQR9Q6ZVX9 377 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 CEP57Q86XR8 500 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 FUKQ8N0W3 1084 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 KLHL23Q8NBE8 558 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 ACRBPQ8NEB7 543 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 KIAA1524Q8TCG1 905 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 TMEM209Q96SK2 561 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 LPIN3Q9BQK8 851 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 FAM49BQ9NUQ9 324 aa16.99■□□□□ 0.31
CLDN11-208ENST00000488989 LILRB3O75022 631 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 RTN2O75298 545 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 IPO7O95373 1038 aaKnown RBP16.98■□□□□ 0.31
CLDN11-208ENST00000488989 SETSIPP0DME0 302 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 CCDC130P13994 396 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 MYOGP15173 224 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 CTNNB1P35222 781 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 GPD2P43304 727 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 GLUD2P49448 558 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 ERVK-21P61565 698 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 SPA17Q15506 151 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 GOLGA7BQ2TAP0 167 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 CTXN3Q4LDR2 81 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 MDH1BQ5I0G3 518 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 CCDC122Q5T0U0 273 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 ACAD10Q6JQN1 1059 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 DENND1BQ6P3S1 775 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 ZNF662Q6ZS27 426 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 LRRTM3Q86VH5 581 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 TTC30AQ86WT1 665 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 DCP1BQ8IZD4 617 aaKnown RBP16.98■□□□□ 0.31
CLDN11-208ENST00000488989 TDHQ8IZJ6 230 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms