RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 TSPY1Q01534 308 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 MCM6Q14566 821 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 ZNF268Q14587 947 aaPredicted RBP20.54■□□□□ 0.88
GGPS1-206ENST00000488594 SF3A2Q15428 464 aaKnown RBP20.54■□□□□ 0.88
GGPS1-206ENST00000488594 KBTBD6Q86V97 674 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 MON1AQ86VX9 555 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 ZC3H10Q96K80 434 aaKnown RBP20.54■□□□□ 0.88
GGPS1-206ENST00000488594 ANGPTL2Q9UKU9 493 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 CCL26Q9Y258 94 aa20.54■□□□□ 0.88
GGPS1-206ENST00000488594 OTOL1A6NHN0 477 aaPredicted RBP20.53■□□□□ 0.88
GGPS1-206ENST00000488594 TM4SF5O14894 197 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 IL18RAPO95256 599 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 PLCG1P19174 1290 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 CDR1P51861 262 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 POSTNQ15063 836 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 PLA2G2CQ5R387 149 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 TRIM68Q6AZZ1 485 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 KRI1Q8N9T8 703 aaKnown RBP20.53■□□□□ 0.88
GGPS1-206ENST00000488594 LRRC15Q8TF66 581 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 LEO1Q8WVC0 666 aaPredicted RBP20.53■□□□□ 0.88
GGPS1-206ENST00000488594 HVCN1Q96D96 273 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 CHFRQ96EP1 664 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 ABCB6Q9NP58 842 aa20.53■□□□□ 0.88
GGPS1-206ENST00000488594 UXTQ9UBK9 157 aaPredicted RBP20.53■□□□□ 0.88
GGPS1-206ENST00000488594 RNF40O75150 1001 aa20.52■□□□□ 0.88
GGPS1-206ENST00000488594 PRPF40AO75400 957 aaKnown RBP20.52■□□□□ 0.88
GGPS1-206ENST00000488594 EGFP01133 1207 aa20.52■□□□□ 0.88
GGPS1-206ENST00000488594 ZC2HC1CQ53FD0 456 aaPredicted RBP20.52■□□□□ 0.88
GGPS1-206ENST00000488594 TXNDC8Q6A555 127 aa20.52■□□□□ 0.88
GGPS1-206ENST00000488594 EFCAB13Q8IY85 973 aa20.52■□□□□ 0.88
GGPS1-206ENST00000488594 CPA6Q8N4T0 437 aa20.52■□□□□ 0.88
GGPS1-206ENST00000488594 POMGNT1Q8WZA1 660 aa20.52■□□□□ 0.88
GGPS1-206ENST00000488594 LARP4BQ92615 738 aaKnown RBP20.52■□□□□ 0.88
GGPS1-206ENST00000488594 P2RY13Q9BPV8 354 aa20.52■□□□□ 0.88
GGPS1-206ENST00000488594 VPS45Q9NRW7 570 aa20.52■□□□□ 0.88
GGPS1-206ENST00000488594 RALGAPA1Q6GYQ0 2036 aa20.52■□□□□ 0.87
GGPS1-206ENST00000488594 KIF26AQ9ULI4 1882 aaPredicted RBP20.51■□□□□ 0.87
GGPS1-206ENST00000488594 TISP43B9A030 160 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 ARSAP15289 507 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 PMLP29590 882 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 MPLP40238 635 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 RPL10AP62906 217 aaKnown RBP20.51■□□□□ 0.87
GGPS1-206ENST00000488594 SHC2P98077 582 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 KARSQ15046 597 aaKnown RBP20.51■□□□□ 0.87
GGPS1-206ENST00000488594 RABEP1Q15276 862 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 CCDC6Q16204 474 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 STPG1Q5TH74 334 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 ACBD6Q9BR61 282 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 MAGED2Q9UNF1 606 aaPredicted RBP20.51■□□□□ 0.87
GGPS1-206ENST00000488594 CHD8Q9HCK8 2581 aa20.51■□□□□ 0.87
GGPS1-206ENST00000488594 MAP1BP46821 2468 aaKnown RBP20.51■□□□□ 0.87
GGPS1-206ENST00000488594 GJB2P29033 226 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 DDIT3P35638 169 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 GALK1P51570 392 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 FAM160A1Q05DH4 1040 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 ELF2Q15723 593 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 N4BP2L1Q5TBK1 243 aaPredicted RBP20.5■□□□□ 0.87
GGPS1-206ENST00000488594 CRELD2Q6UXH1 353 aaPredicted RBP20.5■□□□□ 0.87
GGPS1-206ENST00000488594 SYT13Q7L8C5 426 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 ZNF720Q7Z2F6 126 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 TMEM86AQ8N2M4 240 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 TRMT2BQ96GJ1 504 aaKnown RBP20.5■□□□□ 0.87
GGPS1-206ENST00000488594 MYRFLQ96LU7 910 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 PI4K2AQ9BTU6 479 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 TMEM206Q9H813 350 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 RXFP3Q9NSD7 469 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 TMLHEQ9NVH6 421 aa20.5■□□□□ 0.87
GGPS1-206ENST00000488594 GREB1Q4ZG55 1949 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 NOL4O94818 638 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 GJA4P35212 333 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 MTF1Q14872 753 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 PLK5Q496M5 336 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 PDCL2Q8N4E4 241 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 CCDC26Q8TAB7 109 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 SPATA18Q8TC71 538 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 ATP2A3Q93084 1043 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 ACDQ96AP0 544 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 ECT2Q9H8V3 914 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 FBRSL1Q9HCM7 1045 aaKnown RBP20.49■□□□□ 0.87
GGPS1-206ENST00000488594 SEL1LQ9UBV2 794 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 EBF1Q9UH73 591 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 EXOC7Q9UPT5 735 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 SCN1AP35498 2009 aa20.49■□□□□ 0.87
GGPS1-206ENST00000488594 CNOT1A5YKK6 2376 aaKnown RBP20.48■□□□□ 0.87
GGPS1-206ENST00000488594 HUS1O60921 280 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 RHOBTB1O94844 696 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 APBB3O95704 486 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 USP17L7P0C7H9 530 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 ADSSP30520 456 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 GPR15P49685 360 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 MYL7Q01449 175 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 LRRC52Q8N7C0 313 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 RIN3Q8TB24 985 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 CACTINQ8WUQ7 758 aaKnown RBP20.48■□□□□ 0.87
GGPS1-206ENST00000488594 OSCP1Q8WVF1 389 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 TMX3Q96JJ7 454 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 HHIPQ96QV1 700 aa20.48■□□□□ 0.87
GGPS1-206ENST00000488594 LSM14BQ9BX40 385 aaKnown RBP20.48■□□□□ 0.87
GGPS1-206ENST00000488594 DUS2Q9NX74 493 aaKnown RBP20.48■□□□□ 0.87
GGPS1-206ENST00000488594 DDX43Q9NXZ2 648 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms