RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 DNAI2Q9GZS0 605 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 ABCB6Q9NP58 842 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 AVENQ9NQS1 362 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-207ENST00000488591 ASAH2Q9NR71 780 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 RAB20Q9NX57 234 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 MRPS23Q9Y3D9 190 aaKnown RBP16.09■□□□□ 0.17
CXCL12-207ENST00000488591 DENND4AQ7Z401 1863 aa16.09■□□□□ 0.17
CXCL12-207ENST00000488591 N4BP1O75113 896 aaKnown RBP16.08■□□□□ 0.16
CXCL12-207ENST00000488591 RPL10AP62906 217 aaKnown RBP16.08■□□□□ 0.16
CXCL12-207ENST00000488591 NOP14P78316 857 aaKnown RBP16.08■□□□□ 0.16
CXCL12-207ENST00000488591 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.16
CXCL12-207ENST00000488591 FAM171BQ6P995 826 aa16.08■□□□□ 0.16
CXCL12-207ENST00000488591 SCARA5Q6ZMJ2 495 aa16.08■□□□□ 0.16
CXCL12-207ENST00000488591 SLC35C1Q96A29 364 aa16.08■□□□□ 0.16
CXCL12-207ENST00000488591 FUBP3Q96I24 572 aaKnown RBP eCLIP16.08■□□□□ 0.16
CXCL12-207ENST00000488591 TNIP3Q96KP6 325 aa16.08■□□□□ 0.16
CXCL12-207ENST00000488591 CRISPLD1Q9H336 500 aa16.08■□□□□ 0.16
CXCL12-207ENST00000488591 SMYD3Q9H7B4 428 aa16.08■□□□□ 0.16
CXCL12-207ENST00000488591 TMLHEQ9NVH6 421 aa16.08■□□□□ 0.16
CXCL12-207ENST00000488591 CEP72Q9P209 647 aa16.08■□□□□ 0.16
CXCL12-207ENST00000488591 MAGEC2Q9UBF1 373 aaPredicted RBP16.08■□□□□ 0.16
CXCL12-207ENST00000488591 LIMD1Q9UGP4 676 aa16.08■□□□□ 0.16
CXCL12-207ENST00000488591 MYBPHLA2RUH7 354 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 HCRTO43612 131 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 ATP2C2O75185 946 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 FGF19O95750 216 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 PTPN1P18031 435 aaKnown RBP16.07■□□□□ 0.16
CXCL12-207ENST00000488591 ERCC5P28715 1186 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CDR1P51861 262 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CDH8P55286 799 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 PSMC1P62191 440 aaKnown RBP16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CYP27A1Q02318 531 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 DPCR1Q3MIW9 517 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CCDC183Q5T5S1 534 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 SPOPLQ6IQ16 392 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 SASS6Q6UVJ0 657 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CREBRFQ8IUR6 639 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 TTC9BQ8N6N2 239 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 MYCBPAPQ8TBZ2 947 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 FAXDC2Q96IV6 333 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 PKMYT1Q99640 499 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 NIF3L1Q9GZT8 377 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CYP3A43Q9HB55 503 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CRTAC1Q9NQ79 661 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.07■□□□□ 0.16
CXCL12-207ENST00000488591 EPS15L1Q9UBC2 864 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CDH7Q9ULB5 785 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 CUL9Q8IWT3 2517 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 C5orf42Q9H799 3197 aa16.07■□□□□ 0.16
CXCL12-207ENST00000488591 DCXO43602 365 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 SOAT2O75908 522 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 MICAL2O94851 1124 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 MYL4P12829 197 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 LAMP2P13473 410 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 CYP2F1P24903 491 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 ASPAP45381 313 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 RAP1GAPP47736 663 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 FMO5P49326 533 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 MARSP56192 900 aaKnown RBP16.06■□□□□ 0.16
CXCL12-207ENST00000488591 CBWD6Q4V339 395 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 MDH1BQ5I0G3 518 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 CBWD3Q5JTY5 395 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 CBWD5Q5RIA9 395 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 DNAJB7Q7Z6W7 309 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-207ENST00000488591 UNC93AQ86WB7 457 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 TTC39CQ8N584 583 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 B3GALNT2Q8NCR0 500 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 ITFG1Q8TB96 612 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 SEMA4DQ92854 862 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 FGF13Q92913 245 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 PSMG2Q969U7 264 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 NXPE3Q969Y0 559 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 MYLPFQ96A32 169 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 ELMO3Q96BJ8 720 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 MYADMQ96S97 322 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 BCO2Q9BYV7 579 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 COQ4Q9Y3A0 265 aa16.06■□□□□ 0.16
CXCL12-207ENST00000488591 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.06■□□□□ 0.16
CXCL12-207ENST00000488591 ATP8B3O60423 1300 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 PI4K2BG5E9Z4 385 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 PMM2O15305 246 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 P4HA2O15460 535 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 PTMSP20962 102 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 MAGEA11P43364 429 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 RBM43Q6ZSC3 357 aaKnown RBP16.05■□□□□ 0.16
CXCL12-207ENST00000488591 FAM114A1Q8IWE2 563 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 TRIM59Q8IWR1 403 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 SCN4BQ8IWT1 228 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 HS6ST3Q8IZP7 471 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 GIPC2Q8TF65 315 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 SDCBP2Q9H190 292 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 DNAJC25Q9H1X3 360 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 APOBEC3GQ9HC16 384 aaKnown RBP16.05■□□□□ 0.16
CXCL12-207ENST00000488591 GDE1Q9NZC3 331 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 IGSF9Q9P2J2 1179 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 MUTYHQ9UIF7 546 aa16.05■□□□□ 0.16
CXCL12-207ENST00000488591 DOCK6Q96HP0 2047 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 VCANP13611 3396 aa16.04■□□□□ 0.16
CXCL12-207ENST00000488591 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms