RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 KINO60870 393 aaKnown RBP15.21■□□□□ 0.03
COL9A2-208ENST00000488463 HMGA1P17096 107 aaKnown RBP15.21■□□□□ 0.03
COL9A2-208ENST00000488463 GJA1P17302 382 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 PCSK1P29120 753 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 PSMC2P35998 433 aaKnown RBP15.21■□□□□ 0.03
COL9A2-208ENST00000488463 ALDH1A3P47895 512 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 VAMP7P51809 220 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 EPHB3P54753 998 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 NCOA4Q13772 614 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 NFE2Q16621 373 aaPredicted RBP15.21■□□□□ 0.03
COL9A2-208ENST00000488463 CFAP221Q4G0U5 840 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 INTS8Q75QN2 995 aaKnown RBP15.21■□□□□ 0.03
COL9A2-208ENST00000488463 PDZD4Q76G19 769 aaPredicted RBP15.21■□□□□ 0.03
COL9A2-208ENST00000488463 FAM186BQ8IYM0 893 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 ELMOD1Q8N336 334 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 SEPT5Q99719 369 aaPredicted RBP15.21■□□□□ 0.03
COL9A2-208ENST00000488463 PLA2G2FQ9BZM2 168 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 SDCBP2Q9H190 292 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 ABCB6Q9NP58 842 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 ASAH2Q9NR71 780 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 ABI2Q9NYB9 513 aaPredicted RBP15.21■□□□□ 0.03
COL9A2-208ENST00000488463 PCDHB5Q9Y5E4 795 aa15.21■□□□□ 0.03
COL9A2-208ENST00000488463 NCANO14594 1321 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 PPP1R3GB7ZBB8 358 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
COL9A2-208ENST00000488463 TRIM49P0CI25 452 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 TRIM49CP0CI26 452 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 SRFP11831 508 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 CYP2F1P24903 491 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 RPL13P26373 211 aaKnown RBP15.2■□□□□ 0.02
COL9A2-208ENST00000488463 GPR15P49685 360 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 UBE2HP62256 183 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 BIRC3Q13489 604 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 TRPC3Q13507 836 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 MORC3Q14149 939 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 MGAT5BQ3V5L5 792 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 FAM78AQ5JUQ0 283 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 CYP4A22Q5TCH4 519 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 ANKRD40Q6AI12 368 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 TANGO2Q6ICL3 276 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 TMEM150AQ86TG1 271 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 FBXL6Q8N531 539 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 SYAP1Q96A49 352 aaPredicted RBP15.2■□□□□ 0.02
COL9A2-208ENST00000488463 PBXIP1Q96AQ6 731 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 ASB16Q96NS5 453 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 MMS19Q96T76 1030 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 SYT15Q9BQS2 421 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 PI4K2AQ9BTU6 479 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 SMYD3Q9H7B4 428 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 SLC2A4RGQ9NR83 387 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 HOOK1Q9UJC3 728 aaKnown RBP15.2■□□□□ 0.02
COL9A2-208ENST00000488463 CDH9Q9ULB4 789 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 R3HCC1Q9Y3T6 440 aaKnown RBP15.2■□□□□ 0.02
COL9A2-208ENST00000488463 NUP210Q8TEM1 1887 aaPredicted RBP15.2■□□□□ 0.02
COL9A2-208ENST00000488463 COL4A2P08572 1712 aa15.2■□□□□ 0.02
COL9A2-208ENST00000488463 COL4A3Q01955 1670 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 ZNF638Q14966 1978 aaKnown RBP15.19■□□□□ 0.02
COL9A2-208ENST00000488463 KRBA1A5PL33 1030 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 TRIM49BA6NDI0 452 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 PHACTR2O75167 634 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 LRRN2O75325 713 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 ECI2O75521 394 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 PDGFRBP09619 1106 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 MYL4P12829 197 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 NPR3P17342 541 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 MAGEA11P43364 429 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 GCLMP48507 274 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 CDH8P55286 799 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 PSMC1P62191 440 aaKnown RBP15.19■□□□□ 0.02
COL9A2-208ENST00000488463 TEAD2Q15562 447 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 ZNF699Q32M78 642 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 STXBP5Q5T5C0 1151 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 IER5LQ5T953 404 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 ISM2Q6H9L7 571 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 MTSS1LQ765P7 747 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 STKLD1Q8NE28 680 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 MYCBPAPQ8TBZ2 947 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 GPR152Q8TDT2 470 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 GIPC2Q8TF65 315 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 FUBP3Q96I24 572 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL9A2-208ENST00000488463 IPO9Q96P70 1041 aaKnown RBP15.19■□□□□ 0.02
COL9A2-208ENST00000488463 KXD1Q9BQD3 176 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 GTPBP4Q9BZE4 634 aaKnown RBP15.19■□□□□ 0.02
COL9A2-208ENST00000488463 DPEP3Q9H4B8 488 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 TRPV4Q9HBA0 871 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 TMEM30AQ9NV96 361 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 NXF1Q9UBU9 619 aaKnown RBP15.19■□□□□ 0.02
COL9A2-208ENST00000488463 ANAPC1Q9H1A4 1944 aa15.19■□□□□ 0.02
COL9A2-208ENST00000488463 A0A1W2PRU2 124 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 CCNE1P24864 410 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 GNL1P36915 607 aaPredicted RBP15.18■□□□□ 0.02
COL9A2-208ENST00000488463 ASPAP45381 313 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 RAP1GAPP47736 663 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 VCPP55072 806 aaKnown RBP15.18■□□□□ 0.02
COL9A2-208ENST00000488463 TNNC1P63316 161 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 GPC5P78333 572 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 LRRC63Q05C16 580 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 DDR2Q16832 855 aa15.18■□□□□ 0.02
COL9A2-208ENST00000488463 SGSM1Q2NKQ1 1148 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms