RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 FAM171BQ6P995 826 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 ZDHHC14Q8IZN3 488 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 OR6B3Q8NGW1 331 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 SEMA4DQ92854 862 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 CORO1BQ9BR76 489 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 SNX25Q9H3E2 840 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 DPEP3Q9H4B8 488 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 GTF3C4Q9UKN8 822 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 CDH9Q9ULB4 789 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 PCDHB5Q9Y5E4 795 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 TECTAO75443 2155 aa17.11■□□□□ 0.33
ERGIC3-216ENST00000488384 ZNF318Q5VUA4 2279 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 PTPRDP23468 1912 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 NRG2O14511 850 aaPredicted RBP17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 PDGFRBP09619 1106 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 HAPLN1P10915 354 aaPredicted RBP17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 P4HA1P13674 534 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 GBP2P32456 591 aaPredicted RBP17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 GNL1P36915 607 aaPredicted RBP17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 MARSP56192 900 aaKnown RBP17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 TMEM31Q5JXX7 168 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 PRSS36Q5K4E3 855 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 ELMOD1Q8N336 334 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 FBXL13Q8NEE6 735 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 ITFG1Q8TB96 612 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 MYLPFQ96A32 169 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 ACSF2Q96CM8 615 aaPredicted RBP17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 SRRTQ9BXP5 876 aaKnown RBP17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 BCO2Q9BYV7 579 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 IMPG2Q9BZV3 1241 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 NIF3L1Q9GZT8 377 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 ABCB6Q9NP58 842 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 AVENQ9NQS1 362 aaPredicted RBP17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 MUTYHQ9UIF7 546 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 TRIOO75962 3097 aa17.1■□□□□ 0.33
ERGIC3-216ENST00000488384 GNA14O95837 355 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 PTPN2P17706 415 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 CCR2P41597 374 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 ALDH1A3P47895 512 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 TUFMP49411 452 aaKnown RBP17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 EPHB3P54753 998 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 EPHA5P54756 1037 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 CFAP221Q4G0U5 840 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 IQCEQ6IPM2 695 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 TMC8Q8IU68 726 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 TRIM59Q8IWR1 403 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 PLCD3Q8N3E9 789 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 LPIN3Q9BQK8 851 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 LRRC3Q9BY71 257 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 RAB20Q9NX57 234 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 EPS15L1Q9UBC2 864 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 HMGXB4Q9UGU5 601 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 COQ4Q9Y3A0 265 aa17.09■□□□□ 0.33
ERGIC3-216ENST00000488384 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
ERGIC3-216ENST00000488384 A8MXQ7 604 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 CEBPBP17676 345 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 CYP2F1P24903 491 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 FMO5P49326 533 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 GPR15P49685 360 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 MDH1BQ5I0G3 518 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 PDZD4Q76G19 769 aaPredicted RBP17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 SPATA2LQ8IUW3 424 aaPredicted RBP17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 NPAS3Q8IXF0 933 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 B3GALNT2Q8NCR0 500 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 MYCBPAPQ8TBZ2 947 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 ING5Q8WYH8 240 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 FGF13Q92913 245 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 PSMG2Q969U7 264 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 TCEAL4Q96EI5 215 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 PCED1BQ96HM7 432 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 ZNF512Q96ME7 567 aaPredicted RBP17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 ZNF334Q9HCZ1 680 aaPredicted RBP17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 ASAH2Q9NR71 780 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 CDH7Q9ULB5 785 aa17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 MRPS23Q9Y3D9 190 aaKnown RBP17.08■□□□□ 0.32
ERGIC3-216ENST00000488384 DCXO43602 365 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 ASGR2P07307 311 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 LAMP2P13473 410 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 PTPN1P18031 435 aaKnown RBP17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 ERCC5P28715 1186 aaPredicted RBP17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 INCA1Q0VD86 236 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 VEPH1Q14D04 833 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 MAPRE1Q15691 268 aaKnown RBP17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 PTPN21Q16825 1174 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 CCDC183Q5T5S1 534 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 POTEHQ6S545 545 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 C4orf50Q6ZRC1 276 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 IRF2BP1Q8IU81 584 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 LEMD2Q8NC56 503 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 CNOT6LQ96LI5 555 aaKnown RBP17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 TMEM63CQ9P1W3 806 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 LIMD1Q9UGP4 676 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 DACH1Q9UI36 760 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 ASB3Q9Y575 518 aa17.07■□□□□ 0.32
ERGIC3-216ENST00000488384 PMM2O15305 246 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms