RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 ITGB1P05556 798 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 CSF2RAP15509 400 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 CAPN2P17655 700 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 EN2P19622 333 aaPredicted RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 RRM1P23921 792 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 LMO2P25791 158 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 ITGB8P26012 769 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 TKTP29401 623 aaKnown RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 CDH5P33151 784 aaPredicted RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 GNL1P36915 607 aaPredicted RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 AARSP49588 968 aaKnown RBP eCLIP7.33□□□□□ -1.242e-6■■■■□ 23.3
PDAP1-203ENST00000488214 BCAT1P54687 386 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 BCAR1P56945 870 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 C1QBPQ07021 282 aaKnown RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 DSC1Q08554 894 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 IKBKEQ14164 716 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 STILQ15468 1287 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 PTPN20Q4JDL3 420 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 TIGD5Q53EQ6 642 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 MDH1BQ5I0G3 518 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 PPP1R26Q5T8A7 1209 aaPredicted RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 CYP4A22Q5TCH4 519 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 C11orf63Q6NUN7 778 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 FAM117BQ6P1L5 589 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 DNAJC24Q6P3W2 148 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 DAAM2Q86T65 1068 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 METTL23Q86XA0 190 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 PHF13Q86YI8 300 aaPredicted RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 COLGALT2Q8IYK4 626 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 C7orf61Q8IZ16 206 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 SYCE1Q8N0S2 351 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 TMEM86AQ8N2M4 240 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 TMEM199Q8N511 208 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 C12orf29Q8N999 325 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 B3GALNT2Q8NCR0 500 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 UBA3Q8TBC4 463 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 SLC35G2Q8TBE7 412 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 RSPH1Q8WYR4 309 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 TNIP3Q96KP6 325 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 CASD1Q96PB1 797 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 PSMB7Q99436 277 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 LPIN3Q9BQK8 851 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 ZNF518BQ9C0D4 1074 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 ST7Q9NRC1 585 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 KRT82Q9NSB4 513 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 DDX43Q9NXZ2 648 aaKnown RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 DNAJB4Q9UDY4 337 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 PRKAG2Q9UGJ0 569 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 ANAPC7Q9UJX3 599 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 PACSIN2Q9UNF0 486 aaPredicted RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 COG5Q9UP83 839 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 STXBP5LQ9Y2K9 1186 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 SCINQ9Y6U3 715 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 PLXNA3P51805 1871 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 ARHGEF37A1IGU5 675 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 ZBBXA8MT70 800 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 GOLGA8SH3BPF8 625 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 TMEM189-UBE2V1I3L0A0 370 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 M0QZQ0 153 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 PIK3R2O00459 728 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 BUB1BO60566 1050 aaPredicted RBP7.32□□□□□ -1.24
PDAP1-203ENST00000488214 GJB6O95452 261 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 ACRP10323 421 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 MMP8P22894 467 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 PCSK1P29120 753 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 PBX3P40426 434 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 LHX1P48742 406 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 SLC11A1P49279 550 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 RGS7P49802 495 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 CDR1P51861 262 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 DEFB103AP81534 67 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 AMPD2Q01433 879 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 CNGA2Q16280 664 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 ARHGAP17Q68EM7 881 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 MFSD5Q6N075 450 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 DCLRE1AQ6PJP8 1040 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 LCLAT1Q6UWP7 414 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 FAM43BQ6ZT52 329 aaPredicted RBP7.32□□□□□ -1.24
PDAP1-203ENST00000488214 PEX26Q7Z412 305 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 LIMS2Q7Z4I7 341 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 TTC30AQ86WT1 665 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 ERICH1Q86X53 443 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 LRRC57Q8N9N7 239 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 SLC2A14Q8TDB8 520 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 MYLPFQ96A32 169 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 BTBD6Q96KE9 485 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 SUSD3Q96L08 255 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 CPXM1Q96SM3 734 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 MED10Q9BTT4 135 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 LHX5Q9H2C1 402 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 NRDE2Q9H7Z3 1164 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 AVENQ9NQS1 362 aaPredicted RBP7.32□□□□□ -1.24
PDAP1-203ENST00000488214 UVRAGQ9P2Y5 699 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 TJP2Q9UDY2 1190 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 CYTH4Q9UIA0 394 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 DSEQ9UL01 958 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 KIAA1257Q9ULG3 409 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 STRIP2Q9ULQ0 834 aa7.32□□□□□ -1.24
PDAP1-203ENST00000488214 PCDHB8Q9UN66 801 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms