RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 MOSPD3O75425 235 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 HAPLN1P10915 354 aaPredicted RBP18.24■□□□□ 0.51
HMG20B-212ENST00000487894 TUFMP49411 452 aaKnown RBP18.24■□□□□ 0.51
HMG20B-212ENST00000487894 PSMC1P62191 440 aaKnown RBP18.24■□□□□ 0.51
HMG20B-212ENST00000487894 TDGQ13569 410 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 STIM1Q13586 685 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 UBALD2Q8IYN6 164 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 PSMG2Q969U7 264 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 ASIC4Q96FT7 647 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 LPIN3Q9BQK8 851 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 SMYD3Q9H7B4 428 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 CRTAC1Q9NQ79 661 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 NXF1Q9UBU9 619 aaKnown RBP18.24■□□□□ 0.51
HMG20B-212ENST00000487894 GTF3C4Q9UKN8 822 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 CDH9Q9ULB4 789 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 ASB3Q9Y575 518 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 NUMBLQ9Y6R0 609 aa18.24■□□□□ 0.51
HMG20B-212ENST00000487894 KIF26AQ9ULI4 1882 aaPredicted RBP18.24■□□□□ 0.51
HMG20B-212ENST00000487894 HELZP42694 1942 aaKnown RBP18.23■□□□□ 0.51
HMG20B-212ENST00000487894 MYBPHLA2RUH7 354 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 PPP1R3GB7ZBB8 358 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 ZNF197O14709 1029 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 SLC16A3O15427 465 aaKnown RBP18.23■□□□□ 0.51
HMG20B-212ENST00000487894 ATP2C2O75185 946 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 MICAL2O94851 1124 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 HLA-DRAP01903 254 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 EPB41P11171 864 aaKnown RBP18.23■□□□□ 0.51
HMG20B-212ENST00000487894 MYL4P12829 197 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 PPP1R2P41236 205 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 PIK3CAP42336 1068 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 GCLMP48507 274 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 FKBP3Q00688 224 aaKnown RBP18.23■□□□□ 0.51
HMG20B-212ENST00000487894 CAMK4Q16566 473 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 ZNF667Q5HYK9 610 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 CYP4A22Q5TCH4 519 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 FAM171BQ6P995 826 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 PARM1Q6UWI2 310 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 SCARA5Q6ZMJ2 495 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 LEMD2Q8NC56 503 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 ST13P5Q8NFI4 369 aaPredicted RBP18.23■□□□□ 0.51
HMG20B-212ENST00000487894 FGF14Q92915 247 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 NXPE3Q969Y0 559 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 DHTKD1Q96HY7 919 aaPredicted RBP18.23■□□□□ 0.51
HMG20B-212ENST00000487894 IPO9Q96P70 1041 aaKnown RBP18.23■□□□□ 0.51
HMG20B-212ENST00000487894 PI4K2AQ9BTU6 479 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 ZNF334Q9HCZ1 680 aaPredicted RBP18.23■□□□□ 0.51
HMG20B-212ENST00000487894 ABCB6Q9NP58 842 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 DUSP12Q9UNI6 340 aa18.23■□□□□ 0.51
HMG20B-212ENST00000487894 TMEM221A6NGB7 291 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 M0R296 226 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 NARSO43776 548 aaKnown RBP18.22■□□□□ 0.51
HMG20B-212ENST00000487894 CLSTN1O94985 981 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 ASS1P00966 412 aaKnown RBP18.22■□□□□ 0.51
HMG20B-212ENST00000487894 PDGFRBP09619 1106 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 FAM163BP0C2L3 166 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 RAP1GAPP47736 663 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 CFAP221Q4G0U5 840 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 KLHL10Q6JEL2 608 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 MTSS1LQ765P7 747 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 DNAJB7Q7Z6W7 309 aaPredicted RBP18.22■□□□□ 0.51
HMG20B-212ENST00000487894 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 OR6B3Q8NGW1 331 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 SHKBP1Q8TBC3 707 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 TAS1R2Q8TE23 839 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 TAF4BQ92750 862 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 MYLPFQ96A32 169 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 MCRS1Q96EZ8 462 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 SDCBP2Q9H190 292 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 SNX25Q9H3E2 840 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 MMRN2Q9H8L6 949 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 TMEM8AQ9HCN3 771 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 GDE1Q9NZC3 331 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 KIAA1468Q9P260 1216 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 CTNND2Q9UQB3 1225 aa18.22■□□□□ 0.51
HMG20B-212ENST00000487894 TICRRQ7Z2Z1 1910 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 MYO16Q9Y6X6 1858 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 GJA1P17302 382 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 CYP2F1P24903 491 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 GNL1P36915 607 aaPredicted RBP18.21■□□□□ 0.51
HMG20B-212ENST00000487894 GPR15P49685 360 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 CDH8P55286 799 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 VEPH1Q14D04 833 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 SGSM1Q2NKQ1 1148 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 SPOPLQ6IQ16 392 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 TTI2Q6NXR4 508 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 HFE2Q6ZVN8 426 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 SPATA2LQ8IUW3 424 aaPredicted RBP18.21■□□□□ 0.51
HMG20B-212ENST00000487894 SLC44A3Q8N4M1 653 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 TRIML1Q8N9V2 468 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 FAM200AQ8TCP9 573 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 GIPC2Q8TF65 315 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 NELFBQ8WX92 580 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 FUBP3Q96I24 572 aaKnown RBP eCLIP18.21■□□□□ 0.51
HMG20B-212ENST00000487894 DUSP9Q99956 384 aaKnown RBP18.21■□□□□ 0.51
HMG20B-212ENST00000487894 RPP25Q9BUL9 199 aaKnown RBP18.21■□□□□ 0.51
HMG20B-212ENST00000487894 DPEP3Q9H4B8 488 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 CLSTN2Q9H4D0 955 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 LMBRD1Q9NUN5 540 aa18.21■□□□□ 0.51
HMG20B-212ENST00000487894 A0A1W2PRU2 124 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 FCARP24071 287 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms