RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PDCLQ13371 301 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 BFSP2Q13515 415 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 GPNMBQ14956 572 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 ARHGAP17Q68EM7 881 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 ADGRF2Q8IZF7 708 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 PDCL2Q8N4E4 241 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 C3orf58Q8NDZ4 430 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 OR6B3Q8NGW1 331 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 FEZF2Q8TBJ5 459 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 BUD13Q9BRD0 619 aaKnown RBP eCLIP10□□□□□ -0.818e-41■□□□□ 9.4
SF3B1-211ENST00000487698 SELENOOQ9BVL4 669 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 DPEP3Q9H4B8 488 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 RBM12Q9NTZ6 932 aaKnown RBP10□□□□□ -0.81
SF3B1-211ENST00000487698 CACNG4Q9UBN1 327 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 TJP2Q9UDY2 1190 aa10□□□□□ -0.81
SF3B1-211ENST00000487698 TTC3P53804 2025 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 A8MXQ7 604 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 MYO1FO00160 1098 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 PGRMC1O00264 195 aaKnown RBP9.99□□□□□ -0.81
SF3B1-211ENST00000487698 GABRDO14764 452 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 SPOPO43791 374 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 CEP104O60308 925 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 HUS1O60921 280 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 NBNO60934 754 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 GJB6O95452 261 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 MYCP01106 439 aaPredicted RBP9.99□□□□□ -0.81
SF3B1-211ENST00000487698 ERBB2P04626 1255 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 MAN1A1P33908 653 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 SLC1A1P43005 524 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 RPL7AP62424 266 aaKnown RBP9.99□□□□□ -0.81
SF3B1-211ENST00000487698 FAM189BP81408 668 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 TAP1Q03518 808 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 ZNF252P-AS1Q0IIN9 211 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 UPP1Q16831 310 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 GOLGA7BQ2TAP0 167 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 PPP1R26Q5T8A7 1209 aaPredicted RBP9.99□□□□□ -0.81
SF3B1-211ENST00000487698 CYP4A22Q5TCH4 519 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 DNAJC24Q6P3W2 148 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 FBXO38Q6PIJ6 1188 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 SLC24A5Q71RS6 500 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 OSTM1Q86WC4 334 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 TTC30AQ86WT1 665 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 XYLT1Q86Y38 959 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 UBL4BQ8N7F7 174 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 RNF169Q8NCN4 708 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 PCDHA3Q9Y5H8 950 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 MICAL3Q7RTP6 2002 aa9.99□□□□□ -0.81
SF3B1-211ENST00000487698 CYB561D2O14569 222 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 EOMESO95936 686 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 SETSIPP0DME0 302 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 LMO2P25791 158 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 GNL1P36915 607 aaPredicted RBP9.98□□□□□ -0.81
SF3B1-211ENST00000487698 FAM43BQ6ZT52 329 aaPredicted RBP9.98□□□□□ -0.81
SF3B1-211ENST00000487698 ANKRD33Q7Z3H0 272 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 UBA3Q8TBC4 463 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 C18orf8Q96DM3 657 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 SENP8Q96LD8 212 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 RNPC3Q96LT9 517 aaKnown RBP9.98□□□□□ -0.81
SF3B1-211ENST00000487698 PNKPQ96T60 521 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 PAAF1Q9BRP4 392 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 FTHL17Q9BXU8 183 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 PARD6BQ9BYG5 372 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 SNX25Q9H3E2 840 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 FAM49BQ9NUQ9 324 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 WDR35Q9P2L0 1181 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 LCMT1Q9UIC8 334 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 RAB21Q9UL25 225 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 PTPRDP23468 1912 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 TARSL2A2RTX5 802 aaKnown RBP9.98□□□□□ -0.81
SF3B1-211ENST00000487698 CASTOR2A6NHX0 329 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 POMCP01189 267 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 RHOXF2BP0C7M4 288 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 OGDHQ02218 1023 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 TUSC3Q13454 348 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 ZNF268Q14587 947 aaPredicted RBP9.98□□□□□ -0.81
SF3B1-211ENST00000487698 PLEKHG4Q58EX7 1191 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 CLLU1OSQ5K130 101 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 WSCD1Q658N2 575 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 CD300LGQ6UXG3 332 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 TMEM86AQ8N2M4 240 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 NIPA2Q8N8Q9 360 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 MCRS1Q96EZ8 462 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 MCEEQ96PE7 176 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 LPIN3Q9BQK8 851 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 RHOXF2Q9BQY4 288 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 IP6K2Q9UHH9 426 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 NLRC5Q86WI3 1866 aa9.98□□□□□ -0.81
SF3B1-211ENST00000487698 SIGLEC16A6NMB1 481 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 PDGFRBP09619 1106 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 PSMC1P62191 440 aaKnown RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 FNIP1Q8TF40 1166 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 STK32AQ8WU08 396 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 SLC35F5Q8WV83 523 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 DDX27Q96GQ7 796 aaKnown RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 ZNF333Q96JL9 665 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 TNIP3Q96KP6 325 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 UROC1Q96N76 676 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 SLC4A5Q9BY07 1137 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms