RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 LAS1LQ9Y4W2 734 aaKnown RBP5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 PSME4Q14997 1843 aa5.06□□□□□ -1.6
SNRNP40-205ENST00000486941 ATRNL1Q5VV63 1379 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 RTL9Q8NET4 1388 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 MYBBP1AQ9BQG0 1328 aaKnown RBP5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 DRGXA6NNA5 263 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 ECE2O60344 883 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 PRAMEF4O60810 478 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 FKBP9O95302 570 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 ZNF853P0CG23 659 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 LSSP48449 732 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 USP14P54578 494 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 FBXO42Q6P3S6 717 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 FRMD7Q6ZUT3 714 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 C16orf86Q6ZW13 317 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 FKBP9P1Q75LS8 142 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 PLXDC1Q8IUK5 500 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 CCDC146Q8IYE0 955 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 SYNPOQ8N3V7 929 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 AGBL3Q8NEM8 1001 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 COQ10AQ96MF6 247 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 CHMP4AQ9BY43 222 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 KCTD10Q9H3F6 313 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 FANCLQ9NW38 375 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 CDY2AQ9Y6F7 541 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 ZNF609O15014 1411 aa5.05□□□□□ -1.6
SNRNP40-205ENST00000486941 MYH3P11055 1940 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 ADM5C9JUS6 153 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 KDM1AO60341 852 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 NRP2O60462 931 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 PCCAP05165 728 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 XPAP23025 273 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 DDX6P26196 483 aaKnown RBP eCLIP5.04□□□□□ -1.63e-6■□□□□ 10
SNRNP40-205ENST00000486941 CHN2P52757 468 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 LGALS4P56470 323 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 ZNF280AP59817 542 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 FKBP1BP68106 108 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 GUCY1B3Q02153 619 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 KIF23Q02241 960 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 RESTQ13127 1097 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 WDR43Q15061 677 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 CCDC152Q4G0S7 254 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 AGAP9Q5VTM2 703 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 DLK2Q6UY11 383 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 Q6ZVL8 140 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 RD3Q7Z3Z2 195 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 GLB1L2Q8IW92 636 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 LCORLQ8N3X6 602 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 CCDC191Q8NCU4 936 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 OR14C36Q8NHC7 312 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 EAF2Q96CJ1 260 aaPredicted RBP5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 CDC5LQ99459 802 aaKnown RBP5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 RNF186Q9NXI6 227 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 COL4A1P02462 1669 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 CACNA1FO60840 1977 aa5.04□□□□□ -1.6
SNRNP40-205ENST00000486941 A0A087X0B3 334 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 GSG1L2A8MUP6 293 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 B5MCH6 92 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 DIRC3C9JPN6 131 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 PDE8AO60658 829 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 UFL1O94874 794 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 RBP3P10745 1247 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 MMP14P50281 582 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 SCNN1BP51168 640 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 NRG3P56975 720 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 GNAI1P63096 354 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 CALD1Q05682 793 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 STRIP1Q5VSL9 837 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 B3GNTL1Q67FW5 361 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 EFCAB12Q6NXP0 572 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 SYCE2Q6PIF2 218 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 GPR149Q86SP6 731 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 FBXO18Q8NFZ0 1043 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 TFAP2CQ92754 450 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 CDCA5Q96FF9 252 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 TOPORSQ9NS56 1045 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 CWC25Q9NXE8 425 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 GGA3Q9NZ52 723 aa5.03□□□□□ -1.6
SNRNP40-205ENST00000486941 PAPPA2Q9BXP8 1791 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 CXorf49A8MYA2 514 aaPredicted RBP5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 MGST3O14880 152 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 PRSS23O95084 383 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 DDX58O95786 925 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 CFIP05156 583 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 HKR1P10072 659 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 ID4P47928 161 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 KRTAP10-11P60412 298 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 DDX10Q13206 875 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 CCDC30Q5VVM6 783 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 ZKSCAN2Q63HK3 967 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 CTU1Q7Z7A3 348 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 GLCCI1Q86VQ1 547 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 RASSF3Q86WH2 238 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 HOMER1Q86YM7 354 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 ANKRD18AQ8IVF6 992 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 CMIPQ8IY22 773 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 SLC5A5Q92911 643 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 MYD88Q99836 296 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 LRFN3Q9BTN0 628 aa5.02□□□□□ -1.61
SNRNP40-205ENST00000486941 WNT8AQ9H1J5 351 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms