RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 TICRRQ7Z2Z1 1910 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 MYMKA6NI61 221 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 PRPF40AO75400 957 aaKnown RBP20.2■□□□□ 0.82
GMDS-205ENST00000486793 POLR2BP30876 1174 aaKnown RBP20.2■□□□□ 0.82
GMDS-205ENST00000486793 TFAMQ00059 246 aaKnown RBP20.2■□□□□ 0.82
GMDS-205ENST00000486793 TSPY1Q01534 308 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 BFSP1Q12934 665 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 TMEM196Q5HYL7 178 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 FSTL4Q6MZW2 842 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 MON1AQ86VX9 555 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 PDCL2Q8N4E4 241 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 STKLD1Q8NE28 680 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 CHFRQ96EP1 664 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 CCDC39Q9UFE4 941 aa20.2■□□□□ 0.82
GMDS-205ENST00000486793 ITGB3P05106 788 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 DDX6P26196 483 aaKnown RBP eCLIP20.19■□□□□ 0.82
GMDS-205ENST00000486793 PNPLA4P41247 253 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 GRSF1Q12849 480 aaKnown RBP eCLIP20.19■□□□□ 0.82
GMDS-205ENST00000486793 NFE2Q16621 373 aaPredicted RBP20.19■□□□□ 0.82
GMDS-205ENST00000486793 DDR2Q16832 855 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 RRAGBQ5VZM2 374 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 C1orf127Q8N9H9 656 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 MRPS31Q92665 395 aaKnown RBP20.19■□□□□ 0.82
GMDS-205ENST00000486793 DNAJC19Q96DA6 116 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 SAAL1Q96ER3 474 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 ZNF560Q96MR9 790 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 ACCSQ96QU6 501 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 ACBD6Q9BR61 282 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 FBRSL1Q9HCM7 1045 aaKnown RBP20.19■□□□□ 0.82
GMDS-205ENST00000486793 DDX43Q9NXZ2 648 aaKnown RBP20.19■□□□□ 0.82
GMDS-205ENST00000486793 SEL1LQ9UBV2 794 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 L1RE1Q9UN81 338 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 EXOC7Q9UPT5 735 aa20.19■□□□□ 0.82
GMDS-205ENST00000486793 TRDMT1O14717 391 aaKnown RBP20.18■□□□□ 0.82
GMDS-205ENST00000486793 AXIN1O15169 862 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 CSH1P0DML2 217 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 CSH2P0DML3 217 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 ARSAP15289 507 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 ACAT1P24752 427 aaKnown RBP20.18■□□□□ 0.82
GMDS-205ENST00000486793 CYP2F1P24903 491 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 PPM1JQ5JR12 505 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 L1TD1Q5T7N2 865 aaKnown RBP20.18■□□□□ 0.82
GMDS-205ENST00000486793 CC2D1AQ6P1N0 951 aaPredicted RBP20.18■□□□□ 0.82
GMDS-205ENST00000486793 SV2BQ7L1I2 683 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 RIN3Q8TB24 985 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 FAM84AQ96KN4 292 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 CLIC6Q96NY7 704 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 POLR3BQ9NW08 1133 aaPredicted RBP20.18■□□□□ 0.82
GMDS-205ENST00000486793 STK17AQ9UEE5 414 aa20.18■□□□□ 0.82
GMDS-205ENST00000486793 FBXO2Q9UK22 296 aaPredicted RBP20.18■□□□□ 0.82
GMDS-205ENST00000486793 SRPRBQ9Y5M8 271 aaKnown RBP20.18■□□□□ 0.82
GMDS-205ENST00000486793 PDCD11Q14690 1871 aaKnown RBP20.18■□□□□ 0.82
GMDS-205ENST00000486793 VPS37CA5D8V6 355 aaPredicted RBP20.17■□□□□ 0.82
GMDS-205ENST00000486793 SOBPA7XYQ1 873 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 HUS1O60921 280 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 ATG13O75143 517 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 ADRB1P08588 477 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 GAP43P17677 238 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 GALK1P51570 392 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 BRSK2Q8IWQ3 736 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 CSGALNACT2Q8N6G5 542 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 CXorf38Q8TB03 319 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 CACTINQ8WUQ7 758 aaKnown RBP20.17■□□□□ 0.82
GMDS-205ENST00000486793 ARRDC1-AS1Q9H2J1 176 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 KIF9Q9HAQ2 790 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 RBAKQ9NYW8 714 aaPredicted RBP20.17■□□□□ 0.82
GMDS-205ENST00000486793 GTF3C4Q9UKN8 822 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 SLC8A2Q9UPR5 921 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 PCDHB13Q9Y5F0 798 aa20.17■□□□□ 0.82
GMDS-205ENST00000486793 GOLGA8IPA6NC78 632 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 GOLGA8JA6NMD2 632 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 FOXD2O60548 495 aaPredicted RBP20.16■□□□□ 0.82
GMDS-205ENST00000486793 GCNT3O95395 438 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 LDHAP00338 332 aaKnown RBP20.16■□□□□ 0.82
GMDS-205ENST00000486793 EGFP01133 1207 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 CASP5P51878 434 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 RPL10AP62906 217 aaKnown RBP20.16■□□□□ 0.82
GMDS-205ENST00000486793 AMPD2Q01433 879 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 CACNA2D4Q7Z3S7 1137 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 LEO1Q8WVC0 666 aaPredicted RBP20.16■□□□□ 0.82
GMDS-205ENST00000486793 GAB3Q8WWW8 586 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 CYP2S1Q96SQ9 504 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 PKMYT1Q99640 499 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 PANK2Q9BZ23 570 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 UPF2Q9HAU5 1272 aaKnown RBP20.16■□□□□ 0.82
GMDS-205ENST00000486793 ABCB6Q9NP58 842 aa20.16■□□□□ 0.82
GMDS-205ENST00000486793 CCDC163A0A0D9SF12 145 aa20.15■□□□□ 0.82
GMDS-205ENST00000486793 RNF40O75150 1001 aa20.15■□□□□ 0.82
GMDS-205ENST00000486793 TADA3O75528 432 aa20.15■□□□□ 0.82
GMDS-205ENST00000486793 RPP40O75818 363 aaKnown RBP20.15■□□□□ 0.82
GMDS-205ENST00000486793 NOL4O94818 638 aa20.15■□□□□ 0.82
GMDS-205ENST00000486793 GARTP22102 1010 aa20.15■□□□□ 0.82
GMDS-205ENST00000486793 MYL7Q01449 175 aa20.15■□□□□ 0.82
GMDS-205ENST00000486793 ZNF268Q14587 947 aaPredicted RBP20.15■□□□□ 0.82
GMDS-205ENST00000486793 PDGFRLQ15198 375 aa20.15■□□□□ 0.82
GMDS-205ENST00000486793 CCDC6Q16204 474 aa20.15■□□□□ 0.82
GMDS-205ENST00000486793 CCDC142Q17RM4 750 aa20.15■□□□□ 0.82
GMDS-205ENST00000486793 INTS6LQ5JSJ4 861 aaKnown RBP20.15■□□□□ 0.82
GMDS-205ENST00000486793 NAIF1Q69YI7 327 aaPredicted RBP20.15■□□□□ 0.82
GMDS-205ENST00000486793 FAM173BQ6P4H8 233 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms