RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 CETN1Q12798 172 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 CAPSQ13938 189 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 EMC10Q5UCC4 262 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 AGMOQ6ZNB7 445 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 MAEAQ7L5Y9 396 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 HS2ST1Q7LGA3 356 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 KCNK18Q7Z418 384 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 TMEM173Q86WV6 379 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-208ENST00000486533 EEF2KMTQ96G04 330 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 RUNDC3BQ96NL0 473 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 RAB17Q9H0T7 212 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 ISCUQ9H1K1 167 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 RSAD1Q9HA92 442 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 EPB41L5Q9HCM4 733 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 FAM114A2Q9NRY5 505 aa9.62□□□□□ -0.87
COL12A1-208ENST00000486533 USP15Q9Y4E8 981 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-208ENST00000486533 CNTNAP2Q9UHC6 1331 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 CARNS1A5YM72 827 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 TSPAN1O60635 241 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 GPR37L1O60883 481 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 ZMYND10O75800 440 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 POMCP01189 267 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 NR3C1P04150 777 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 UCHL3P15374 230 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 HSPA9P38646 679 aaKnown RBP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 EIF3BP55884 814 aaKnown RBP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 MYBPC2Q14324 1141 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 HLTFQ14527 1009 aaKnown RBP eCLIP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 PPP2R5AQ15172 486 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 PCBP1Q15365 356 aaKnown RBP eCLIP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 ALKBH5Q6P6C2 394 aaKnown RBP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 NOTUMQ6P988 496 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 EPM2AIP1Q7L775 607 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 PEX26Q7Z412 305 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 CATSPER3Q86XQ3 398 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 GSPT2Q8IYD1 628 aaKnown RBP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 VPS52Q8N1B4 723 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 MRPL43Q8N983 215 aaKnown RBP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 BCAS4Q8TDM0 211 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 ASAP3Q8TDY4 903 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 CPB2Q96IY4 423 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 ATP6V1G3Q96LB4 118 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 FAM193BQ96PV7 902 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 KRT12Q99456 494 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 APOL5Q9BWW9 433 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 TRIM6Q9C030 488 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 POLR3FQ9H1D9 316 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-208ENST00000486533 NRDE2Q9H7Z3 1164 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 C11orf16Q9NQ32 467 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 DNAJB4Q9UDY4 337 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 RASAL2Q9UJF2 1139 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 AMFRQ9UKV5 643 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 FRMD4BQ9Y2L6 1034 aa9.61□□□□□ -0.87
COL12A1-208ENST00000486533 NCANO14594 1321 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 A0A087X0T9 212 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.6□□□□□ -0.87
COL12A1-208ENST00000486533 C2orf71A6NGG8 1288 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 LRRIQ4A6NIV6 560 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 NDUFAB1O14561 156 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 KCNK3O14649 394 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 MED24O75448 989 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 GCNT3O95395 438 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 CXCL14O95715 111 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 GALTP07902 379 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 FAM228BP0C875 321 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 MYZAPP0CAP1 466 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 SPATA31C1P0DKV0 1188 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 MYBL2P10244 700 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ITGA4P13612 1032 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 NR1D1P20393 614 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 GLRA2P23416 452 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 AXLP30530 894 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ARL2P36404 184 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 AFF1P51825 1210 aaKnown RBP9.6□□□□□ -0.87
COL12A1-208ENST00000486533 MBTD1Q05BQ5 628 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 GIT2Q14161 759 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 UBXN11Q5T124 520 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 AGBL2Q5U5Z8 902 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 TCERG1LQ5VWI1 586 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ANKRD54Q6NXT1 300 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 MRPL10Q7Z7H8 261 aaKnown RBP9.6□□□□□ -0.87
COL12A1-208ENST00000486533 TADA2BQ86TJ2 420 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 SFR1Q86XK3 245 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ZNF280BQ86YH2 543 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 AUTS2Q8WXX7 1259 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 IFT81Q8WYA0 676 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 CTNNBL1Q8WYA6 563 aaPredicted RBP9.6□□□□□ -0.87
COL12A1-208ENST00000486533 IGSF21Q96ID5 467 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ZIM3Q96PE6 472 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 NACC1Q96RE7 527 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 APOL6Q9BWW8 343 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 EIF2AQ9BY44 585 aaKnown RBP9.6□□□□□ -0.87
COL12A1-208ENST00000486533 FAM129AQ9BZQ8 928 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ZBP1Q9H171 429 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 GPRC5CQ9NQ84 441 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 GCNT4Q9P109 453 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 KANSL3Q9P2N6 904 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 ADAMTS1Q9UHI8 967 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 MUTYHQ9UIF7 546 aa9.6□□□□□ -0.87
COL12A1-208ENST00000486533 NAGPAQ9UK23 515 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms