RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ASPAP45381 313 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 BRCC3P46736 316 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 GLUD2P49448 558 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 NDST1P52848 882 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 RABGGTBP53611 331 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 CDH8P55286 799 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 ARPP19P56211 112 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 SMARCB1Q12824 385 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 NAB2Q15742 525 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 TIGD5Q53EQ6 642 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 SGO2Q562F6 1265 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 WSCD1Q658N2 575 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 GJB7Q6PEY0 223 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 C4orf50Q6ZRC1 276 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 CCDC186Q7Z3E2 898 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 DDX53Q86TM3 631 aaKnown RBP7.4□□□□□ -1.22
UBR4-214ENST00000486515 ZNF677Q86XU0 584 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 TMTC1Q8IUR5 882 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 VPS52Q8N1B4 723 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 CRIPAKQ8N1N5 446 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 RBBP8NLQ8NC74 664 aaPredicted RBP7.4□□□□□ -1.22
UBR4-214ENST00000486515 FBXO22Q8NEZ5 403 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 LMO3Q8TAP4 145 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 IGSF21Q96ID5 467 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 PANX2Q96RD6 677 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 BAG1Q99933 345 aaPredicted RBP7.4□□□□□ -1.22
UBR4-214ENST00000486515 EMILIN2Q9BXX0 1053 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 BCO2Q9BYV7 579 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 MIS12Q9H081 205 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 XYLT2Q9H1B5 865 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 CXCL16Q9H2A7 254 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 GANQ9H2C0 597 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 CWH43Q9H720 699 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 SMYD3Q9H7B4 428 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 APOBEC3GQ9HC16 384 aaKnown RBP7.4□□□□□ -1.22
UBR4-214ENST00000486515 ENTPD7Q9NQZ7 604 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.4□□□□□ -1.226e-16■■□□□ 13.8
UBR4-214ENST00000486515 ABHD10Q9NUJ1 306 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 DPP7Q9UHL4 492 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 CDH9Q9ULB4 789 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 TIMM13Q9Y5L4 95 aaPredicted RBP7.4□□□□□ -1.22
UBR4-214ENST00000486515 MTCH2Q9Y6C9 303 aa7.4□□□□□ -1.22
UBR4-214ENST00000486515 SCN5AQ14524 2016 aa7.4□□□□□ -1.23
UBR4-214ENST00000486515 I3L4J1 428 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 M0QZQ0 153 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 FOXN3O00409 490 aaPredicted RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 C2CD2LO14523 706 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 PPEF2O14830 753 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 MEFVO15553 781 aaPredicted RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 CYP26A1O43174 497 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 CILPO75339 1184 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 ZIC2O95409 532 aaPredicted RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 SOD2P04179 222 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 CYP11A1P05108 521 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 CA3P07451 260 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 ANXA13P27216 316 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 TKTP29401 623 aaKnown RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 PBX3P40426 434 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 RAP1GAPP47736 663 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 KRT83P78385 493 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 PLCB3Q01970 1234 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 CYP27A1Q02318 531 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 UBE3AQ05086 875 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 SMC1AQ14683 1233 aaKnown RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 PSMD5Q16401 504 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 TAF12Q16514 161 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 NFE2Q16621 373 aaPredicted RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 PTPROQ16827 1216 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 SOWAHAQ2M3V2 549 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 PDE12Q6L8Q7 609 aaKnown RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 TRIM72Q6ZMU5 477 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 SPATA2LQ8IUW3 424 aaPredicted RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 SUGP1Q8IWZ8 645 aaKnown RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 CCDC170Q8IYT3 715 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 SLC39A11Q8N1S5 342 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 PDCL2Q8N4E4 241 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 KLHL23Q8NBE8 558 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 RIN2Q8WYP3 895 aaPredicted RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 SHC3Q92529 594 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 FAM84AQ96KN4 292 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 SYT15Q9BQS2 421 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 ACBD6Q9BR61 282 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 MRPL45Q9BRJ2 306 aaKnown RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 PAAF1Q9BRP4 392 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 SYNCQ9H7C4 482 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 SIX2Q9NPC8 291 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 NGRNQ9NPE2 291 aaKnown RBP7.39□□□□□ -1.23
UBR4-214ENST00000486515 AIPL1Q9NZN9 384 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 CACNG4Q9UBN1 327 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 MTUS1Q9ULD2 1270 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 L1RE1Q9UN81 338 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 DMXL1Q9Y485 3027 aa7.39□□□□□ -1.23
UBR4-214ENST00000486515 NAV2Q8IVL1 2488 aa7.38□□□□□ -1.23
UBR4-214ENST00000486515 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.38□□□□□ -1.23
UBR4-214ENST00000486515 LINC01553A4QN01 128 aa7.38□□□□□ -1.23
UBR4-214ENST00000486515 H0Y858 1186 aa7.38□□□□□ -1.23
UBR4-214ENST00000486515 EPHB6O15197 1021 aa7.38□□□□□ -1.23
UBR4-214ENST00000486515 SPTLC1O15269 473 aa7.38□□□□□ -1.23
UBR4-214ENST00000486515 CCP110O43303 1012 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms