RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 FILIP1Q7Z7B0 1213 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 KIAA2013Q8IYS2 634 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 MYCT1Q8N699 235 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 IQCDQ96DY2 449 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 BICD1Q96G01 975 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 LRRC3BQ96PB8 259 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 LRRC3Q9BY71 257 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 ZHX3Q9H4I2 956 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 C17orf75Q9HAS0 396 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 ZNF334Q9HCZ1 680 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 SAMSN1Q9NSI8 373 aaKnown RBP10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 SPATA6Q9NWH7 488 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 TBX20Q9UMR3 447 aa10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 ANKRD11Q6UB99 2663 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-208ENST00000486159 SCN1AP35498 2009 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 FRMD3A2A2Y4 597 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 H7C4K7 107 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 K7ENM7 598 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 M0QZQ0 153 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 ECI2O75521 394 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 LMNAP02545 664 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 TUBB4AP04350 444 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 TPM1P09493 284 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 CPB1P15086 417 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 LRPAP1P30533 357 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 ACOT2P49753 483 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 LIG4P49917 911 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 SMTNP53814 917 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 STX17P56962 302 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 CSTF1Q05048 431 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 DUSP4Q13115 394 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 ACAP1Q15027 740 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 TCP11X2Q5H9J9 407 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 JADE1Q6IE81 842 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 CENPPQ6IPU0 288 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 ZNF280DQ6N043 979 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 TTI2Q6NXR4 508 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 ZPBP2Q6X784 338 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 APBB1IPQ7Z5R6 666 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 SMYD4Q8IYR2 804 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 SUMF1Q8NBK3 374 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 ATAD1Q8NBU5 361 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 BEST2Q8NFU1 509 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 TTC8Q8TAM2 541 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 SHKBP1Q8TBC3 707 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 CACTINQ8WUQ7 758 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 ELSPBP1Q96BH3 223 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 DNAJC19Q96DA6 116 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 RMDN1Q96DB5 314 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 ASB16Q96NS5 453 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 NAP1L5Q96NT1 182 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 TSG101Q99816 390 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 TIPINQ9BVW5 301 aa10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 AVENQ9NQS1 362 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 NDRG2Q9UN36 371 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.11□□□□□ -0.79
TMEM39A-208ENST00000486159 TSC2P49815 1807 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 CFAP47Q6ZTR5 3102 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 A0A1W2PRU2 124 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 KCNJ18B7U540 433 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 FAM13AO94988 1023 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 CLTAP09496 248 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 SKILP12757 684 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 GAP43P17677 238 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 GDI1P31150 447 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 ID4P47928 161 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 SOX9P48436 509 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 AARSP49588 968 aaKnown RBP eCLIP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 ZNF131P52739 623 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 TERF1P54274 439 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 PRKCQQ04759 706 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 YWHAHQ04917 246 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 KCNA1Q09470 495 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 STK4Q13043 487 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 MTAPQ13126 283 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 TBX2Q13207 712 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 KCNJ12Q14500 433 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 TPGS2Q68CL5 300 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 DSTYKQ6XUX3 929 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 PDZD4Q76G19 769 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 APTXQ7Z2E3 356 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 TMC8Q8IU68 726 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 CSGALNACT2Q8N6G5 542 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 STKLD1Q8NE28 680 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 OR10T2Q8NGX3 314 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 SHDQ96IW2 340 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 ZFYVE19Q96K21 471 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 ZNF512Q96ME7 567 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 ZNF830Q96NB3 372 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 MKNK1Q9BUB5 465 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 FGFBP2Q9BYJ0 223 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 RPF1Q9H9Y2 349 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 PANK4Q9NVE7 773 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 C2orf42Q9NWW7 574 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 GDE1Q9NZC3 331 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 TBC1D7Q9P0N9 293 aa10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 AFF4Q9UHB7 1163 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 CPSF3Q9UKF6 684 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-208ENST00000486159 YIPF1Q9Y548 306 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms