RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 VCPP55072 806 aaKnown RBP18.47■□□□□ 0.55
TNXB-205ENST00000486148 MKRN3Q13064 507 aaKnown RBP18.47■□□□□ 0.55
TNXB-205ENST00000486148 MTFR1Q15390 333 aa18.47■□□□□ 0.55
TNXB-205ENST00000486148 SCARA5Q6ZMJ2 495 aa18.47■□□□□ 0.55
TNXB-205ENST00000486148 FAM47EQ6ZV65 393 aa18.47■□□□□ 0.55
TNXB-205ENST00000486148 RIBC1Q8N443 379 aaPredicted RBP18.47■□□□□ 0.55
TNXB-205ENST00000486148 TMEM35BQ8NCS4 154 aa18.47■□□□□ 0.55
TNXB-205ENST00000486148 MSCO60682 206 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 DIAPH2O60879 1101 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 LSM8O95777 96 aaKnown RBP18.46■□□□□ 0.55
TNXB-205ENST00000486148 NQO1P15559 274 aaKnown RBP18.46■□□□□ 0.55
TNXB-205ENST00000486148 RFC5P40937 340 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 COPS2P61201 443 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 PKN2Q16513 984 aaKnown RBP18.46■□□□□ 0.55
TNXB-205ENST00000486148 TFDP3Q5H9I0 405 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 RNASEH2BQ5TBB1 312 aaKnown RBP18.46■□□□□ 0.55
TNXB-205ENST00000486148 ANKLE1Q8NAG6 615 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 YIPF3Q9GZM5 350 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 DRG1Q9Y295 367 aaKnown RBP18.46■□□□□ 0.55
TNXB-205ENST00000486148 BANF1O75531 89 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 FARP2O94887 1054 aaPredicted RBP18.46■□□□□ 0.55
TNXB-205ENST00000486148 CEP128Q6ZU80 1094 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 ZBED8Q8IZ13 594 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 KIF2BQ8N4N8 673 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 NIF3L1Q9GZT8 377 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 C10orf88Q9H8K7 445 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 RXFP1Q9HBX9 757 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 SLC5A4Q9NY91 659 aa18.46■□□□□ 0.55
TNXB-205ENST00000486148 SAE1Q9UBE0 346 aaPredicted RBP18.46■□□□□ 0.55
TNXB-205ENST00000486148 IGF2BP3O00425 579 aaKnown RBP eCLIP18.46■□□□□ 0.54
TNXB-205ENST00000486148 ASMTLO95671 621 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 ITGBL1O95965 494 aaPredicted RBP18.46■□□□□ 0.54
TNXB-205ENST00000486148 IFNB1P01574 187 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 IL9RQ01113 521 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 ZPBP2Q6X784 338 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 ECHDC2Q86YB7 292 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 SPOCK2Q92563 424 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 MRRFQ96E11 262 aaKnown RBP18.46■□□□□ 0.54
TNXB-205ENST00000486148 TTC25Q96NG3 672 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 ADAM33Q9BZ11 813 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 PITPNM3Q9BZ71 974 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 VPS37BQ9H9H4 285 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 TJP2Q9UDY2 1190 aa18.46■□□□□ 0.54
TNXB-205ENST00000486148 CORO1CQ9ULV4 474 aaPredicted RBP18.46■□□□□ 0.54
TNXB-205ENST00000486148 TOM1L1O75674 476 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 LINGO3P0C6S8 592 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 PTPN7P35236 360 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 ALDH5A1P51649 535 aaPredicted RBP18.45■□□□□ 0.54
TNXB-205ENST00000486148 STAT5BP51692 787 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 PLCB3Q01970 1234 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 PIGHQ14442 188 aaPredicted RBP18.45■□□□□ 0.54
TNXB-205ENST00000486148 MORF4L2Q15014 288 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 ANGEL2Q5VTE6 544 aaKnown RBP18.45■□□□□ 0.54
TNXB-205ENST00000486148 ERICH1Q86X53 443 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 GBP7Q8N8V2 638 aaPredicted RBP18.45■□□□□ 0.54
TNXB-205ENST00000486148 DNERQ8NFT8 737 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 DENND1AQ8TEH3 1009 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 NKD2Q969F2 451 aaPredicted RBP18.45■□□□□ 0.54
TNXB-205ENST00000486148 TRABDQ9H4I3 376 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 NRBP2Q9NSY0 501 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 HOXC10Q9NYD6 342 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 NOP53Q9NZM5 478 aaKnown RBP18.45■□□□□ 0.54
TNXB-205ENST00000486148 TRIM33Q9UPN9 1127 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 C3orf70A6NLC5 250 aaPredicted RBP18.45■□□□□ 0.54
TNXB-205ENST00000486148 GOLGA8SH3BPF8 625 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 GOLGA8MH3BSY2 632 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 SGK1O00141 431 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 MAFO75444 373 aaPredicted RBP18.45■□□□□ 0.54
TNXB-205ENST00000486148 SRGAP2CP0DJJ0 459 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 DYNLT1P63172 113 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 GAD2Q05329 585 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 DALRD3Q5D0E6 543 aaKnown RBP18.45■□□□□ 0.54
TNXB-205ENST00000486148 TDRPQ86YL5 185 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 C4orf33Q8N1A6 199 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 GRID1Q9ULK0 1009 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 AFG3L2Q9Y4W6 797 aa18.45■□□□□ 0.54
TNXB-205ENST00000486148 ALOX15BO15296 676 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 ITGAVP06756 1048 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 ALADP13716 330 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 AP3M2P53677 418 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 PDIA2Q13087 525 aaKnown RBP18.44■□□□□ 0.54
TNXB-205ENST00000486148 ZNF268Q14587 947 aaPredicted RBP18.44■□□□□ 0.54
TNXB-205ENST00000486148 SMTNL2Q2TAL5 461 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 DENND1BQ6P3S1 775 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 ARFGAP1Q8N6T3 406 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 PRCCQ92733 491 aaPredicted RBP18.44■□□□□ 0.54
TNXB-205ENST00000486148 ACO2Q99798 780 aaKnown RBP18.44■□□□□ 0.54
TNXB-205ENST00000486148 MRPL4Q9BYD3 311 aaKnown RBP18.44■□□□□ 0.54
TNXB-205ENST00000486148 KLHL14Q9P2G3 628 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 LOC285556D6RIA3 1793 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 RFC1P35251 1148 aaPredicted RBP18.44■□□□□ 0.54
TNXB-205ENST00000486148 ABL2P42684 1182 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 RAB27AP51159 221 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 TFAMQ00059 246 aaKnown RBP18.44■□□□□ 0.54
TNXB-205ENST00000486148 DNAJC3Q13217 504 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 DUOXA2Q1HG44 320 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 SGSM1Q2NKQ1 1148 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 RNF43Q68DV7 783 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 ANKMY2Q8IV38 441 aa18.44■□□□□ 0.54
TNXB-205ENST00000486148 NIPA2Q8N8Q9 360 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms