RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 SOWAHAQ2M3V2 549 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 NOMO2Q5JPE7 1267 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 PAPD7Q5XG87 772 aaKnown RBP10.11□□□□□ -0.79
CTSA-208ENST00000485627 ACOT1Q86TX2 421 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 RTN4RL1Q86UN2 441 aaPredicted RBP10.11□□□□□ -0.79
CTSA-208ENST00000485627 METTL23Q86XA0 190 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 PHF13Q86YI8 300 aaPredicted RBP10.11□□□□□ -0.79
CTSA-208ENST00000485627 TMEM86AQ8N2M4 240 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 C1orf131Q8NDD1 294 aaKnown RBP10.11□□□□□ -0.79
CTSA-208ENST00000485627 GSTCDQ8NEC7 633 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 UBE2Q2Q8WVN8 375 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 TFAP2BQ92481 460 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 SENP8Q96LD8 212 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 TWNKQ96RR1 684 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 C11orf70Q9BRQ4 267 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 MIS12Q9H081 205 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 ELAC1Q9H777 363 aaKnown RBP10.11□□□□□ -0.79
CTSA-208ENST00000485627 OSGEPQ9NPF4 335 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 AVENQ9NQS1 362 aaPredicted RBP10.11□□□□□ -0.79
CTSA-208ENST00000485627 TMEM161AQ9NX61 479 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 HMGXB4Q9UGU5 601 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 STRIP2Q9ULQ0 834 aa10.11□□□□□ -0.79
CTSA-208ENST00000485627 UQCRHLA0A096LP55 91 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 ENPP3O14638 875 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 SPTLC1O15269 473 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 FANCGO15287 622 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 INPPL1O15357 1258 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 ATMINO43313 823 aaPredicted RBP10.1□□□□□ -0.79
CTSA-208ENST00000485627 BUB1BO60566 1050 aaPredicted RBP10.1□□□□□ -0.79
CTSA-208ENST00000485627 B3GAT3O94766 335 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 MICAL2O94851 1124 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 UQCRHP07919 91 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 CFHP08603 1231 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 CLTBP09497 229 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 PDGFRBP09619 1106 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 PRLRP16471 622 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 WARSP23381 471 aaKnown RBP10.1□□□□□ -0.79
CTSA-208ENST00000485627 CYP2C18P33260 490 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 PAFAH1B1P43034 410 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 LHX1P48742 406 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 AFF1P51825 1210 aaKnown RBP10.1□□□□□ -0.79
CTSA-208ENST00000485627 HADHBP55084 474 aaKnown RBP10.1□□□□□ -0.79
CTSA-208ENST00000485627 MESDQ14696 234 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 MEI1Q5TIA1 1274 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 CCDC181Q5TID7 509 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 DENND1BQ6P3S1 775 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 DNAJC24Q6P3W2 148 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 MMS22LQ6ZRQ5 1243 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 MON1BQ7L1V2 547 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 DEFB128Q7Z7B8 93 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 IPO4Q8TEX9 1081 aaKnown RBP10.1□□□□□ -0.79
CTSA-208ENST00000485627 LINC01599Q8WXQ3 324 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 SCLYQ96I15 445 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 CARD6Q9BX69 1037 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 PARVAQ9NVD7 372 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 LCMT1Q9UIC8 334 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 DSEQ9UL01 958 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 SNX12Q9UMY4 172 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 L1RE1Q9UN81 338 aa10.1□□□□□ -0.79
CTSA-208ENST00000485627 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTSA-208ENST00000485627 TMEM110-MUSTN1A8MSY1 372 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 MYO1FO00160 1098 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 O00370 1275 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 NCK2O43639 380 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 SPOPO43791 374 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 MTA2O94776 668 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 MMP8P22894 467 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 RRM1P23921 792 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 CDH5P33151 784 aaPredicted RBP10.09□□□□□ -0.79
CTSA-208ENST00000485627 RFC2P35250 354 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 DNA2P51530 1060 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 SLC8A3P57103 927 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 AMPD2Q01433 879 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 TAP1Q03518 808 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 UPP1Q16831 310 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 LRRC26Q2I0M4 334 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 GOLGA7BQ2TAP0 167 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 WSCD1Q658N2 575 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 ARHGAP17Q68EM7 881 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 C11orf63Q6NUN7 778 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 DCUN1D2Q6PH85 259 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 DCLRE1AQ6PJP8 1040 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 LCLAT1Q6UWP7 414 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 SLFN11Q7Z7L1 901 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 PHLDB2Q86SQ0 1253 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 CRYBG2Q8N1P7 616 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 UBL4BQ8N7F7 174 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 LRRC57Q8N9N7 239 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 RSPH1Q8WYR4 309 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 CAPZA3Q96KX2 299 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 OSBPL9Q96SU4 736 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 ZSWIM1Q9BR11 485 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 SELENOOQ9BVL4 669 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 SLC24A3Q9HC58 644 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 ST7Q9NRC1 585 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 FAM49BQ9NUQ9 324 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 WDR35Q9P2L0 1181 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 ANAPC7Q9UJX3 599 aa10.09□□□□□ -0.79
CTSA-208ENST00000485627 TSPAN16Q9UKR8 245 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms