RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SLC47A2Q86VL8 602 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 DCP1BQ8IZD4 617 aaKnown RBP18.7■□□□□ 0.58
CHMP3-207ENST00000485465 PKMYT1Q99640 499 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 CLSTN3Q9BQT9 956 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 LMAN2LQ9H0V9 348 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 ZNF576Q9H609 170 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 NGRNQ9NPE2 291 aaKnown RBP18.7■□□□□ 0.58
CHMP3-207ENST00000485465 FNIP2Q9P278 1114 aa18.7■□□□□ 0.58
CHMP3-207ENST00000485465 CHD9Q3L8U1 2897 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 ADAM12O43184 909 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 OR4Q2P0C623 313 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 CD19P15391 556 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 CYP11B1P15538 503 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 RPL17P18621 184 aaKnown RBP18.69■□□□□ 0.58
CHMP3-207ENST00000485465 GNA15P30679 374 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 CA8P35219 290 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 GSDMDP57764 484 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 MDH1BQ5I0G3 518 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 PLPP4Q5VZY2 271 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 SLC8B1Q6J4K2 584 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 PDE12Q6L8Q7 609 aaKnown RBP18.69■□□□□ 0.58
CHMP3-207ENST00000485465 MRPL43Q8N983 215 aaKnown RBP18.69■□□□□ 0.58
CHMP3-207ENST00000485465 C12orf29Q8N999 325 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 MYCBPAPQ8TBZ2 947 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 MICAL1Q8TDZ2 1067 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 GDPD5Q8WTR4 605 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 TFAP2BQ92481 460 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 ZNHIT6Q9NWK9 470 aaKnown RBP18.69■□□□□ 0.58
CHMP3-207ENST00000485465 GTF3C4Q9UKN8 822 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 IRAK3Q9Y616 596 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 CDY1Q9Y6F8 540 aa18.69■□□□□ 0.58
CHMP3-207ENST00000485465 TMEM265A0A087WTH1 108 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.68■□□□□ 0.58
CHMP3-207ENST00000485465 C2orf71A6NGG8 1288 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 CSPG5O95196 566 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 BRD2P25440 801 aaKnown RBP18.68■□□□□ 0.58
CHMP3-207ENST00000485465 OR1D2P34982 312 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 IRS1P35568 1242 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 PRKCIP41743 596 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 PDE6CP51160 858 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 ARPP19P56211 112 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 KLHL30Q0D2K2 578 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 MAPRE1Q15691 268 aaKnown RBP18.68■□□□□ 0.58
CHMP3-207ENST00000485465 CCDC142Q17RM4 750 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 SLC39A12Q504Y0 691 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 SGO2Q562F6 1265 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 ARHGAP17Q68EM7 881 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 WDR59Q6PJI9 974 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 CCDC186Q7Z3E2 898 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 NOP9Q86U38 636 aaKnown RBP18.68■□□□□ 0.58
CHMP3-207ENST00000485465 EPS8L1Q8TE68 723 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 ZNF606Q8WXB4 792 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 PANX2Q96RD6 677 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 ZSWIM1Q9BR11 485 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 FAM49BQ9NUQ9 324 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 TMLHEQ9NVH6 421 aa18.68■□□□□ 0.58
CHMP3-207ENST00000485465 HIDE1A8MVS5 230 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 RFXAPO00287 272 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 SOX1O00570 391 aaPredicted RBP18.67■□□□□ 0.58
CHMP3-207ENST00000485465 TEX28O15482 410 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 THAP12O43422 761 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 LPXNO60711 386 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 SERPING1P05155 500 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 CNPP09543 421 aaKnown RBP18.67■□□□□ 0.58
CHMP3-207ENST00000485465 SKILP12757 684 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 CPB1P15086 417 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 NDUFV1P49821 464 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 CCDC173Q0VFZ6 552 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 GPR17Q13304 367 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 MEA1Q16626 185 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 PPP1R26Q5T8A7 1209 aaPredicted RBP18.67■□□□□ 0.58
CHMP3-207ENST00000485465 HGSNATQ68CP4 663 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 DDX1Q92499 740 aaKnown RBP18.67■□□□□ 0.58
CHMP3-207ENST00000485465 CYFIP2Q96F07 1278 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 PCED1BQ96HM7 432 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 KLHL5Q96PQ7 755 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 EMILIN2Q9BXX0 1053 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 B3GNT5Q9BYG0 378 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 NOCTQ9UK39 431 aaKnown RBP18.67■□□□□ 0.58
CHMP3-207ENST00000485465 PCDHGC5Q9Y5F6 944 aa18.67■□□□□ 0.58
CHMP3-207ENST00000485465 BZW2Q9Y6E2 419 aaKnown RBP18.67■□□□□ 0.58
CHMP3-207ENST00000485465 O00370 1275 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 MED7O43513 233 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 CCDC130P13994 396 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 ROR1Q01973 937 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 CYP27A1Q02318 531 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 SMARCB1Q12824 385 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 RAB33AQ14088 237 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 STILQ15468 1287 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 CNGA2Q16280 664 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 NFE2Q16621 373 aaPredicted RBP18.66■□□□□ 0.58
CHMP3-207ENST00000485465 ZNF677Q86XU0 584 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 GLYCTKQ8IVS8 523 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 FUKQ8N0W3 1084 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 SLC2A14Q8TDB8 520 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 SLC20A1Q8WUM9 679 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 MYLPFQ96A32 169 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 PPP1R9BQ96SB3 815 aa18.66■□□□□ 0.58
CHMP3-207ENST00000485465 HNRNPABQ99729 332 aaKnown RBP18.66■□□□□ 0.58
CHMP3-207ENST00000485465 TTYH1Q9H313 450 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms