RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 OR1G1P47890 313 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 DSG1Q02413 1049 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 SEPT6Q14141 434 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 MCMDC2Q4G0Z9 681 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 FAM160B1Q5W0V3 765 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 EFCAB12Q6NXP0 572 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 LILRA6Q6PI73 481 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 CACNA2D4Q7Z3S7 1137 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 ZNF589Q86UQ0 364 aaPredicted RBP6□□□□□ -1.45
PTPN4-210ENST00000485247 CCDC60Q8IWA6 550 aaPredicted RBP6□□□□□ -1.45
PTPN4-210ENST00000485247 SPEM1Q8N4L4 309 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 LRRC71Q8N4P6 559 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 URGCPQ8TCY9 931 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 OTUD7AQ8TE49 926 aaPredicted RBP6□□□□□ -1.45
PTPN4-210ENST00000485247 RSPH1Q8WYR4 309 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 MCRS1Q96EZ8 462 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 MAP7D2Q96T17 732 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 TMEM175Q9BSA9 504 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 UBAC1Q9BSL1 405 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 BRD9Q9H8M2 597 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 ZNF302Q9NR11 478 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 VPS45Q9NRW7 570 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 HELLSQ9NRZ9 838 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 RBM12Q9NTZ6 932 aaKnown RBP6□□□□□ -1.45
PTPN4-210ENST00000485247 HCFC1R1Q9NWW0 138 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 C2orf42Q9NWW7 574 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 MARCH5Q9NX47 278 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 PARP2Q9UGN5 583 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 BAZ2BQ9UIF8 2168 aaKnown RBP6□□□□□ -1.45
PTPN4-210ENST00000485247 ZMYM6O95789 1325 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 DMXL2Q8TDJ6 3036 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 WDFY3Q8IZQ1 3526 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 F8W810 466 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 PAX4O43316 350 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 ECI2O75521 394 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 RPP40O75818 363 aaKnown RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 CCNE2O96020 404 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 CAPNS1P04632 268 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 CCDC192P0DO97 292 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 CD8BP10966 210 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 ITIH2P19823 946 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 CSRP1P21291 193 aaKnown RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 CCNE1P24864 410 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 TMOD1P28289 359 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 KIF5BP33176 963 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 PXNP49023 591 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 GPC3P51654 580 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 DAB2P98082 770 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 TAGLNQ01995 201 aaKnown RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 ITGB3BPQ13352 177 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 GRM4Q14833 912 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 IFI16Q16666 785 aaKnown RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 UBE2SQ16763 222 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 WIPI1Q5MNZ9 446 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 PPM1LQ5SGD2 360 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 LARP1BQ659C4 914 aaKnown RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 TANGO2Q6ICL3 276 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 SWSAP1Q6NVH7 229 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 ABHD15Q6UXT9 468 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 AGMOQ6ZNB7 445 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 Q6ZS52 159 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 ARMCX6Q7L4S7 300 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 WDR5BQ86VZ2 330 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 RNF168Q8IYW5 571 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 AGBL5Q8NDL9 886 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 DEFB124Q8NES8 71 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 GAB3Q8WWW8 586 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 DNASE1L2Q92874 299 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 MISP3Q96FF7 219 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 LRIG1Q96JA1 1093 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 CHST12Q9NRB3 414 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 DDX19BQ9UMR2 479 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 PIN4Q9Y237 131 aaKnown RBP5.99□□□□□ -1.45
PTPN4-210ENST00000485247 PCDHGA5Q9Y5G8 931 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 PIAS3Q9Y6X2 628 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 ITPR1Q14643 2758 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 LOC400499M0QZD8 3231 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 NFASCO94856 1347 aa5.99□□□□□ -1.45
PTPN4-210ENST00000485247 IGSF10Q6WRI0 2623 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 TICRRQ7Z2Z1 1910 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 MAGEB2O15479 319 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 ZNF623O75123 536 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 PAPSS2O95340 614 aaPredicted RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 C1RP00736 705 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 C8AP07357 584 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 HNRNPA1P09651 372 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 LIG3P49916 1009 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 RPS26P62854 115 aaKnown RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 FGD1P98174 961 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 CREB5Q02930 508 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 SCAPQ12770 1279 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 SLBPQ14493 270 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 NKG7Q16617 165 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 UAP1L1Q3KQV9 507 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 PABPC1LQ4VXU2 614 aaKnown RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 LIN9Q5TKA1 542 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 PRSS55Q6UWB4 352 aaPredicted RBP5.98□□□□□ -1.45
PTPN4-210ENST00000485247 LINC01465Q8N7H1 131 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 ELSPBP1Q96BH3 223 aa5.98□□□□□ -1.45
PTPN4-210ENST00000485247 PGBD4Q96DM1 585 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms