RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SHC2P98077 582 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 POSTNQ15063 836 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 PDGFRLQ15198 375 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 SV2CQ496J9 727 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 IL31Q6EBC2 164 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 PKN3Q6P5Z2 889 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 ZNF720Q7Z2F6 126 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 SPATA18Q8TC71 538 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 EXOC4Q96A65 974 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 HVCN1Q96D96 273 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 MYRFLQ96LU7 910 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 STRA6Q9BX79 667 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 ARRDC1-AS1Q9H2J1 176 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 ABCB6Q9NP58 842 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 PCDHB5Q9Y5E4 795 aa14.04□□□□□ -0.16
HDAC6-227ENST00000485102 EML5Q05BV3 1969 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 CFAP47Q6ZTR5 3102 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 AXIN1O15169 862 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 PPP1R37O75864 691 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 IL18RAPO95256 599 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 PLCG1P19174 1290 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 PMLP29590 882 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 NMT1P30419 496 aaKnown RBP14.03□□□□□ -0.16
HDAC6-227ENST00000485102 ADSSP30520 456 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 BFSP1Q12934 665 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 MCM6Q14566 821 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 ST3GAL2Q16842 350 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 KBTBD6Q86V97 674 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 EFCAB13Q8IY85 973 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 MAB21L3Q8N8X9 362 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 GIPC2Q8TF65 315 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 LARP4BQ92615 738 aaKnown RBP14.03□□□□□ -0.16
HDAC6-227ENST00000485102 MRPS31Q92665 395 aaKnown RBP14.03□□□□□ -0.16
HDAC6-227ENST00000485102 TRMT2BQ96GJ1 504 aaKnown RBP14.03□□□□□ -0.16
HDAC6-227ENST00000485102 ACBD6Q9BR61 282 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 SMG9Q9H0W8 520 aaKnown RBP14.03□□□□□ -0.16
HDAC6-227ENST00000485102 UXTQ9UBK9 157 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-227ENST00000485102 EBF1Q9UH73 591 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 SLC8A2Q9UPR5 921 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 CCL26Q9Y258 94 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 CHD6Q8TD26 2715 aa14.03□□□□□ -0.16
HDAC6-227ENST00000485102 ZFHX4Q86UP3 3567 aa14.02□□□□□ -0.16
HDAC6-227ENST00000485102 OBSL1O75147 1896 aa14.02□□□□□ -0.16
HDAC6-227ENST00000485102 H3BQV1 296 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 TBCAO75347 108 aaKnown RBP14.02□□□□□ -0.17
HDAC6-227ENST00000485102 NOL4O94818 638 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 KRT18P05783 430 aaKnown RBP14.02□□□□□ -0.17
HDAC6-227ENST00000485102 TSPY1Q01534 308 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 AASDHQ4L235 1098 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-227ENST00000485102 ZC2HC1CQ53FD0 456 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-227ENST00000485102 TXNDC8Q6A555 127 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 SYT13Q7L8C5 426 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 TMEM86AQ8N2M4 240 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 C12orf50Q8NA57 414 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-227ENST00000485102 ZNF560Q96MR9 790 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 EBF3Q9H4W6 596 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 TMEM206Q9H813 350 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 FBRSL1Q9HCM7 1045 aaKnown RBP14.02□□□□□ -0.17
HDAC6-227ENST00000485102 VPS45Q9NRW7 570 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 ABI2Q9NYB9 513 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-227ENST00000485102 SEL1LQ9UBV2 794 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 ANGPTL2Q9UKU9 493 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 CEP295Q9C0D2 2601 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 ABCA7Q8IZY2 2146 aa14.02□□□□□ -0.17
HDAC6-227ENST00000485102 TISP43B9A030 160 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 RNF40O75150 1001 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 TCF3P15923 654 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 GJB2P29033 226 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 GJA4P35212 333 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 GALK1P51570 392 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 RPL10AP62906 217 aaKnown RBP14.01□□□□□ -0.17
HDAC6-227ENST00000485102 FAM160A1Q05DH4 1040 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 DHX8Q14562 1220 aaKnown RBP14.01□□□□□ -0.17
HDAC6-227ENST00000485102 KARSQ15046 597 aaKnown RBP14.01□□□□□ -0.17
HDAC6-227ENST00000485102 SF3A2Q15428 464 aaKnown RBP14.01□□□□□ -0.17
HDAC6-227ENST00000485102 PLK5Q496M5 336 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 CFAP221Q4G0U5 840 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 STPG1Q5TH74 334 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 TRIM68Q6AZZ1 485 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 CC2D1AQ6P1N0 951 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-227ENST00000485102 LRRC52Q8N7C0 313 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 KRI1Q8N9T8 703 aaKnown RBP14.01□□□□□ -0.17
HDAC6-227ENST00000485102 CCDC26Q8TAB7 109 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 CXorf38Q8TB03 319 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 RIN3Q8TB24 985 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 POMGNT1Q8WZA1 660 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 TMX3Q96JJ7 454 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 PKMYT1Q99640 499 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 P2RY13Q9BPV8 354 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 LSM14BQ9BX40 385 aaKnown RBP14.01□□□□□ -0.17
HDAC6-227ENST00000485102 ECT2Q9H8V3 914 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 TMLHEQ9NVH6 421 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 GDAP2Q9NXN4 497 aa14.01□□□□□ -0.17
HDAC6-227ENST00000485102 ANAPC1Q9H1A4 1944 aa14□□□□□ -0.17
HDAC6-227ENST00000485102 PRPF40AO75400 957 aaKnown RBP14□□□□□ -0.17
HDAC6-227ENST00000485102 TADA3O75528 432 aa14□□□□□ -0.17
HDAC6-227ENST00000485102 LDHAP00338 332 aaKnown RBP14□□□□□ -0.17
HDAC6-227ENST00000485102 EGFP01133 1207 aa14□□□□□ -0.17
HDAC6-227ENST00000485102 CCDC192P0DO97 292 aa14□□□□□ -0.17
HDAC6-227ENST00000485102 GRIN1Q05586 938 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms